Analysis and Interpretation of metagenomics data: an approach
Biol Proced Online. 2022 Nov 19;24(1):18. doi: 10.1186/s12575-022-00179-7.ABSTRACTAdvances in next-generation sequencing technologies have accelerated the momentum of metagenomic studies, which is increasing yearly. The metagenomics field is one of the versatile applications in microbiology, where any interaction in the environment involving microorganisms can be the topic of study. Due to this versatility, the number of applications of this omics technology reached its horizons. Agriculture is a crucial sector involving crop plants and microorganisms interacting together. Hence, studying these interactions through the len...
Source: Biological Procedures Online - November 19, 2022 Category: Molecular Biology Authors: Gauri S Navgire Neha Goel Gifty Sawhney Mohit Sharma Prashant Kaushik Yugal Kishore Mohanta Tapan Kumar Mohanta Ahmed Al-Harrasi Source Type: research
Bayer buys into protein-enhanced chickpea
(Source: Chemical and Engineering News)
Source: Chemical and Engineering News - November 13, 2022 Category: Chemistry Authors: Alex Scott Source Type: research
Viruses, Vol. 14, Pages 2511: Weed Hosts Represent an Important Reservoir of Turnip Yellows Virus and a Possible Source of Virus Introduction into Oilseed Rape Crop
umar Kundu
Turnip yellows virus (TuYV) is one of the most important pathogens of oilseed rape worldwide. The virus has a large host range including many crop species (e.g., oilseed rape, pea, chickpea) and weeds from more than twenty plant families. Other than oilseed rape, we detected TuYV in many commonly grown weed species that share the fields and vegetation period together with canola crops in Czech and Slovak Republics. TuYV was detected by reverse-transcription polymerase chain reaction (RT-PCR) in at least 26 species including main crop hosts (oilseed rape), intercrops and weeds such as Amaranthus retroflexus, ...
Source: Viruses - November 13, 2022 Category: Virology Authors: Lucie Slav íková Emad Ibrahim Glenda Alquicer Jana Toma šechová Katar ína Šoltys Miroslav Glasa Jiban Kumar Kundu Tags: Communication Source Type: research
Biochemical, physiological, and growth evaluation of different chickpea genotypes under varying salinity regimes
Braz J Biol. 2022 Nov 4;82:e268350. doi: 10.1590/1519-6984.268350. eCollection 2022.ABSTRACTBiochemical and physiological parameters, growth, and yield of field crops especially salt sensitive crops like chickpea are affected adversely by salinity in arid to semi-arid regions. To investigate the effect of different salinity levels on growth, biochemical and physiological parameters of chickpea genotypes, a pot experiment following CRD, two factor factorial design, was conducted in the glasshouse at the Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan. Ten (10) kg of soil...
Source: Braz J Biol - November 9, 2022 Category: Biology Authors: J Gul M Ullah Source Type: research
Biochemical, physiological, and growth evaluation of different chickpea genotypes under varying salinity regimes
Braz J Biol. 2022 Nov 4;82:e268350. doi: 10.1590/1519-6984.268350. eCollection 2022.ABSTRACTBiochemical and physiological parameters, growth, and yield of field crops especially salt sensitive crops like chickpea are affected adversely by salinity in arid to semi-arid regions. To investigate the effect of different salinity levels on growth, biochemical and physiological parameters of chickpea genotypes, a pot experiment following CRD, two factor factorial design, was conducted in the glasshouse at the Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan. Ten (10) kg of soil...
Source: Braz J Biol - November 9, 2022 Category: Biology Authors: J Gul M Ullah Source Type: research
Biochemical, physiological, and growth evaluation of different chickpea genotypes under varying salinity regimes
Braz J Biol. 2022 Nov 4;82:e268350. doi: 10.1590/1519-6984.268350. eCollection 2022.ABSTRACTBiochemical and physiological parameters, growth, and yield of field crops especially salt sensitive crops like chickpea are affected adversely by salinity in arid to semi-arid regions. To investigate the effect of different salinity levels on growth, biochemical and physiological parameters of chickpea genotypes, a pot experiment following CRD, two factor factorial design, was conducted in the glasshouse at the Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan. Ten (10) kg of soil...
Source: Braz J Biol - November 9, 2022 Category: Biology Authors: J Gul M Ullah Source Type: research
Biochemical, physiological, and growth evaluation of different chickpea genotypes under varying salinity regimes
Braz J Biol. 2022 Nov 4;82:e268350. doi: 10.1590/1519-6984.268350. eCollection 2022.ABSTRACTBiochemical and physiological parameters, growth, and yield of field crops especially salt sensitive crops like chickpea are affected adversely by salinity in arid to semi-arid regions. To investigate the effect of different salinity levels on growth, biochemical and physiological parameters of chickpea genotypes, a pot experiment following CRD, two factor factorial design, was conducted in the glasshouse at the Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan. Ten (10) kg of soil...
Source: Braz J Biol - November 9, 2022 Category: Biology Authors: J Gul M Ullah Source Type: research
Biochemical, physiological, and growth evaluation of different chickpea genotypes under varying salinity regimes
Braz J Biol. 2022 Nov 4;82:e268350. doi: 10.1590/1519-6984.268350. eCollection 2022.ABSTRACTBiochemical and physiological parameters, growth, and yield of field crops especially salt sensitive crops like chickpea are affected adversely by salinity in arid to semi-arid regions. To investigate the effect of different salinity levels on growth, biochemical and physiological parameters of chickpea genotypes, a pot experiment following CRD, two factor factorial design, was conducted in the glasshouse at the Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan. Ten (10) kg of soil...
Source: Braz J Biol - November 9, 2022 Category: Biology Authors: J Gul M Ullah Source Type: research
Endophytic Bacillus subtilis antagonize soil-borne fungal pathogens and suppress wilt complex disease in chickpea plants (Cicer arietinum L.)
The present study aimed to identify potential endophytic bacteria antagonistic against three soil-borne fungal pathogens, Rhizoctonia solani, Sclerotium rolfsii, and Fusarium oxysporum f.sp. ciceri causing root rot, collar rot, and fungal wilt diseases in chickpea plants, respectively. A total of 255 bacterial endophytes were isolated from the leaves, stems, and roots of seven different crop plants (chickpea, tomato, wheat, berseem, mustard, potato, and green pea). The dual culture-based screening for antifungal properties indicated that three endophytic isolates had strong inhibition (>50%) against all three pathogens ...
Source: Frontiers in Microbiology - November 2, 2022 Category: Microbiology Source Type: research
Chemical Composition and Evaluation of Antifungal and Insecticidal Activities of Essential Oils Extracted from < em > Jambosa caryophyllus < /em > (Thunb.) Nied: Clove Buds
Evid Based Complement Alternat Med. 2022 Oct 19;2022:4675016. doi: 10.1155/2022/4675016. eCollection 2022.ABSTRACTJambosa caryophyllus has been used in traditional phytotherapy as a treatment against infections. In the present work, essential oils extracted from clove buds (Jambosa caryophyllus ) (EO-JC) were investigated for their composition, antifungal, and insecticidal properties. Extraction of EO-JC was performed by use of hydrodistillation using a Clevenger-type apparatus, and the EOs were analyzed by gas chromatography coupled with mass spectrometry (GC-MS). Antifungal activity of EO-JC was evaluated by the use of s...
Source: Evidence-based Complementary and Alternative Medicine - October 31, 2022 Category: Complementary Medicine Authors: Otmane Zouirech Reem Alajmi Hiba El Jeddab Aimad Allali Mohammed Bourhia Abdelfattah El Moussaoui Azeddin El Barnossi Ashraf M Ahmed John P Giesy Mourad A M Aboul-Soud Badiaa Lyoussi El Houssine Derwich Source Type: research
GSE147831 Expression atlas of chickpea during development
In this study, we aim to present a global view of transcriptome dynamics in different tissues/organs/developmental stage in chickpea. We generated about ~31-95 million reads from each of 94 libraries representing 32 different tissues/organs using Illumina platform. We generated a hybrid assembly of these data along with PacBio data to produce full-length transcriptome assembly. We mapped the reads to the transcriptome assembly for estimation of the abundance of coding and long non-coding transcripts in different tissue samples. The transcriptome dynamics was studied by differential and tissue-specific expression analyses, ...
Source: GEO: Gene Expression Omnibus - October 26, 2022 Category: Genetics & Stem Cells Tags: Expression profiling by high throughput sequencing Cicer arietinum Source Type: research
Expression of radish defensin (RsAFP2) gene in chickpea (Cicer arietinum L.) confers resistance to Fusarium wilt disease
CONCLUSION: Our results suggest the application of Radish defensins (RsAFP1/RsAFP2 genes) for improving pathogen resistance in chickpea.PMID:36282461 | DOI:10.1007/s11033-022-08021-9 (Source: Molecular Biology Reports)
Source: Molecular Biology Reports - October 25, 2022 Category: Molecular Biology Authors: SumanKalyan Sadhu Phanikanth Jogam Kranthikumar Gande Vasudha Marapaka Suprasanna Penna Venkataiah Peddaboina Source Type: research
Expression of radish defensin (RsAFP2) gene in chickpea (Cicer arietinum L.) confers resistance to Fusarium wilt disease
CONCLUSION: Our results suggest the application of Radish defensins (RsAFP1/RsAFP2 genes) for improving pathogen resistance in chickpea.PMID:36282461 | DOI:10.1007/s11033-022-08021-9 (Source: Molecular Biology Reports)
Source: Molecular Biology Reports - October 25, 2022 Category: Molecular Biology Authors: SumanKalyan Sadhu Phanikanth Jogam Kranthikumar Gande Vasudha Marapaka Suprasanna Penna Venkataiah Peddaboina Source Type: research
Microscopic appearances of commonly implanted food particles
Conclusion: It is important to study the microscopic appearances of commonly implanted food particles to prevent any diagnostic dilemmas. Further studies are required involving various other food particles and their microscopic appearances. (Source: Journal of Oral and Maxillofacial Pathology)
Source: Journal of Oral and Maxillofacial Pathology - October 17, 2022 Category: ENT & OMF Authors: Reshma Poothakulath Krishnan Pratibha Ramani S Gheena Abilasha Ramasubramanian Monika Karunagaran R Hannah Source Type: research
