The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang
In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infecte...
Source: Infection, Genetics and Evolution - March 3, 2024 Category: Genetics & Stem Cells Authors: Baoping Guo None Cairen Jianyong Wu Wenli Wang Bingjie Wang Yuan Ren Mayire Aizezi Rongsheng Mi Li Zhao Hao Wen Source Type: research
The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang
In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infecte...
Source: Infection, Genetics and Evolution - March 3, 2024 Category: Genetics & Stem Cells Authors: Baoping Guo None Cairen Jianyong Wu Wenli Wang Bingjie Wang Yuan Ren Mayire Aizezi Rongsheng Mi Li Zhao Hao Wen Source Type: research
The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang
In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infecte...
Source: Infection, Genetics and Evolution - March 3, 2024 Category: Genetics & Stem Cells Authors: Baoping Guo None Cairen Jianyong Wu Wenli Wang Bingjie Wang Yuan Ren Mayire Aizezi Rongsheng Mi Li Zhao Hao Wen Source Type: research
The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang
In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infecte...
Source: Infection, Genetics and Evolution - March 3, 2024 Category: Genetics & Stem Cells Authors: Baoping Guo None Cairen Jianyong Wu Wenli Wang Bingjie Wang Yuan Ren Mayire Aizezi Rongsheng Mi Li Zhao Hao Wen Source Type: research
The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang
In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infecte...
Source: Infection, Genetics and Evolution - March 3, 2024 Category: Genetics & Stem Cells Authors: Baoping Guo None Cairen Jianyong Wu Wenli Wang Bingjie Wang Yuan Ren Mayire Aizezi Rongsheng Mi Li Zhao Hao Wen Source Type: research
Revisiting genetic diversity in Echinococcus multilocularis, the role for EmsB microsatellite: A commentary
Infect Genet Evol. 2024 Feb 29:105580. doi: 10.1016/j.meegid.2024.105580. Online ahead of print.NO ABSTRACTPMID:38431092 | DOI:10.1016/j.meegid.2024.105580 (Source: Infection, Genetics and Evolution)
Source: Infection, Genetics and Evolution - March 2, 2024 Category: Genetics & Stem Cells Authors: Mohammad Ali Mohammadi Maid Fasihi Harandi Source Type: research
Exploring the resistome and virulome in major sequence types of Acinetobacter baumannii genomes: Correlations with genome divergence and sequence types
In this study, we aim to explore the relationship between antimicrobial resistance genes, virulence factor genes, and STs using genomic data from 223 publicly available A. baumannii strains. The core phylogeny analysis revealed five predominant STs in A. baumannii genomes, linked to their geographical sources of isolation. Furthermore, the resistome and virulome of A. baumannii followed an evolutionary pattern consistent with their pan-genome evolution. Among the major STs, we observed significant variations in resistant genes against "aminoglycoside" and "sulphonamide" antibiotics, highlighting the role of genotypic varia...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Rachana Banerjee Stephy Mol Robinson Abhishake Lahiri Prateek Verma Ayushman Kumar Banerjee Sohom Basak Kausik Basak Sandip Paul Source Type: research
Whole genome sequence-based characterization of Campylobacter isolated from broiler carcasses over a three-year period in a big poultry slaughterhouse reveals high genetic diversity and a recurring genomic lineage of Campylobacter jejuni
Infect Genet Evol. 2024 Feb 27;119:105578. doi: 10.1016/j.meegid.2024.105578. Online ahead of print.ABSTRACTCampylobacter is among the most frequent agents of bacterial gastroenteritis in Europe and is primarily linked to the consumption of contaminated food. The aim of this study was to assess genomic diversity and to identify antimicrobial resistance and virulence genes of 155 Campylobacter isolated from broiler carcasses (neck skin samples) in a large-scale Swiss poultry abattoir over a three-year period. Samples originated from broilers from three different types of farming systems (particularly animal-friendly stablin...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Marc J A Stevens Roger Stephan Jule Anna Horlbog Nicole Cernela Magdalena N üesch-Inderbinen Source Type: research
Exploring the resistome and virulome in major sequence types of Acinetobacter baumannii genomes: Correlations with genome divergence and sequence types
In this study, we aim to explore the relationship between antimicrobial resistance genes, virulence factor genes, and STs using genomic data from 223 publicly available A. baumannii strains. The core phylogeny analysis revealed five predominant STs in A. baumannii genomes, linked to their geographical sources of isolation. Furthermore, the resistome and virulome of A. baumannii followed an evolutionary pattern consistent with their pan-genome evolution. Among the major STs, we observed significant variations in resistant genes against "aminoglycoside" and "sulphonamide" antibiotics, highlighting the role of genotypic varia...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Rachana Banerjee Stephy Mol Robinson Abhishake Lahiri Prateek Verma Ayushman Kumar Banerjee Sohom Basak Kausik Basak Sandip Paul Source Type: research
Whole genome sequence-based characterization of Campylobacter isolated from broiler carcasses over a three-year period in a big poultry slaughterhouse reveals high genetic diversity and a recurring genomic lineage of Campylobacter jejuni
Infect Genet Evol. 2024 Feb 26:105578. doi: 10.1016/j.meegid.2024.105578. Online ahead of print.ABSTRACTCampylobacter is among the most frequent agents of bacterial gastroenteritis in Europe and is primarily linked to the consumption of contaminated food. The aim of this study was to assess genomic diversity and to identify antimicrobial resistance and virulence genes of 155 Campylobacter isolated from broiler carcasses (neck skin samples) in a large-scale Swiss poultry abattoir over a three-year period. Samples originated from broilers from three different types of farming systems (particularly animal-friendly stabling (P...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Marc J A Stevens Roger Stephan Jule Anna Horlbog Nicole Cernela Magdalena N üesch-Inderbinen Source Type: research
Exploring the resistome and virulome in major sequence types of Acinetobacter baumannii genomes: Correlations with genome divergence and sequence types
In this study, we aim to explore the relationship between antimicrobial resistance genes, virulence factor genes, and STs using genomic data from 223 publicly available A. baumannii strains. The core phylogeny analysis revealed five predominant STs in A. baumannii genomes, linked to their geographical sources of isolation. Furthermore, the resistome and virulome of A. baumannii followed an evolutionary pattern consistent with their pan-genome evolution. Among the major STs, we observed significant variations in resistant genes against "aminoglycoside" and "sulphonamide" antibiotics, highlighting the role of genotypic varia...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Rachana Banerjee Stephy Mol Robinson Abhishake Lahiri Prateek Verma Ayushman Kumar Banerjee Sohom Basak Kausik Basak Sandip Paul Source Type: research
Whole genome sequence-based characterization of Campylobacter isolated from broiler carcasses over a three-year period in a big poultry slaughterhouse reveals high genetic diversity and a recurring genomic lineage of Campylobacter jejuni
Infect Genet Evol. 2024 Feb 26:105578. doi: 10.1016/j.meegid.2024.105578. Online ahead of print.ABSTRACTCampylobacter is among the most frequent agents of bacterial gastroenteritis in Europe and is primarily linked to the consumption of contaminated food. The aim of this study was to assess genomic diversity and to identify antimicrobial resistance and virulence genes of 155 Campylobacter isolated from broiler carcasses (neck skin samples) in a large-scale Swiss poultry abattoir over a three-year period. Samples originated from broilers from three different types of farming systems (particularly animal-friendly stabling (P...
Source: Infection, Genetics and Evolution - February 28, 2024 Category: Genetics & Stem Cells Authors: Marc J A Stevens Roger Stephan Jule Anna Horlbog Nicole Cernela Magdalena N üesch-Inderbinen Source Type: research
Assessment of the genetic diversity of lymnaeid (Gastropoda: Pulmonata) snails and their infection status with trematode cercariae in different regions of Thailand
Infect Genet Evol. 2024 Feb 24;119:105576. doi: 10.1016/j.meegid.2024.105576. Online ahead of print.ABSTRACTLymnaeid snails are some of the most widespread snails and are the first intermediate host of trematode parasites that affect human and livestock health. A full understanding of the genetic relationship of hosts and parasites is of paramount importance for effective parasite management. The present study assessed the prevalence of trematode larvae in lymnaeid snails and examined the genetic diversity of these snails collected across Thailand. We collected 672 lymnaeid snails from 39 locations in 22 provinces of six r...
Source: Infection, Genetics and Evolution - February 26, 2024 Category: Genetics & Stem Cells Authors: Abdulhakam Dumidae Chanakan Subkrasae Jiranun Ardpairin Supawan Pansri Chanatinat Homkaew Chadaporn Nuchjangreed Gordon Bandid Mangkit Aunchalee Thanwisai Apichat Vitta Source Type: research
Assessment of the genetic diversity of lymnaeid (Gastropoda: Pulmonata) snails and their infection status with trematode cercariae in different regions of Thailand
Infect Genet Evol. 2024 Feb 24:105576. doi: 10.1016/j.meegid.2024.105576. Online ahead of print.ABSTRACTLymnaeid snails are some of the most widespread snails and are the first intermediate host of trematode parasites that affect human and livestock health. A full understanding of the genetic relationship of hosts and parasites is of paramount importance for effective parasite management. The present study assessed the prevalence of trematode larvae in lymnaeid snails and examined the genetic diversity of these snails collected across Thailand. We collected 672 lymnaeid snails from 39 locations in 22 provinces of six regio...
Source: Infection, Genetics and Evolution - February 26, 2024 Category: Genetics & Stem Cells Authors: Abdulhakam Dumidae Chanakan Subkrasae Jiranun Ardpairin Supawan Pansri Chanatinat Homkaew Chadaporn Nuchjangreed Gordon Bandid Mangkit Aunchalee Thanwisai Apichat Vitta Source Type: research
Assessment of the genetic diversity of lymnaeid (Gastropoda: Pulmonata) snails and their infection status with trematode cercariae in different regions of Thailand
Infect Genet Evol. 2024 Feb 24:105576. doi: 10.1016/j.meegid.2024.105576. Online ahead of print.ABSTRACTLymnaeid snails are some of the most widespread snails and are the first intermediate host of trematode parasites that affect human and livestock health. A full understanding of the genetic relationship of hosts and parasites is of paramount importance for effective parasite management. The present study assessed the prevalence of trematode larvae in lymnaeid snails and examined the genetic diversity of these snails collected across Thailand. We collected 672 lymnaeid snails from 39 locations in 22 provinces of six regio...
Source: Infection, Genetics and Evolution - February 26, 2024 Category: Genetics & Stem Cells Authors: Abdulhakam Dumidae Chanakan Subkrasae Jiranun Ardpairin Supawan Pansri Chanatinat Homkaew Chadaporn Nuchjangreed Gordon Bandid Mangkit Aunchalee Thanwisai Apichat Vitta Source Type: research
