In silico biotechnological potential of Bacillus sp. strain MHSD_37 bacterial endophyte
This study employed in silico analysis to identify gene... (Source: BMC Genomics)
Source: BMC Genomics - April 24, 2024 Category: Genetics & Stem Cells Authors: Pfariso Maumela, Adivhaho Khwathisi, Ntakadzeni Edwin Madala and Mahloro Hope Serepa-Dlamini Tags: Research Source Type: research
Identification of different myofiber types in pigs muscles and construction of regulatory networks
Skeletal muscle is composed of muscle fibers with different physiological characteristics, which plays an important role in regulating skeletal muscle metabolism, movement and body homeostasis. The type of ske... (Source: BMC Genomics)
Source: BMC Genomics - April 24, 2024 Category: Genetics & Stem Cells Authors: Chenchen Li, Yinuo Wang, Xiaohui Sun, Jinjin Yang, Yingchun Ren, Jinrui Jia, Gongshe Yang, Mingzhi Liao, Jianjun Jin and Xin ’e Shi Tags: Research Source Type: research
Analysis and prediction of interactions between transmembrane and non-transmembrane proteins
Most of the important biological mechanisms and functions of transmembrane proteins (TMPs) are realized through their interactions with non-transmembrane proteins(nonTMPs). The interactions between TMPs and no... (Source: BMC Genomics)
Source: BMC Genomics - April 24, 2024 Category: Genetics & Stem Cells Authors: Chang Lu, Jiuhong Jiang, Qiufen Chen, Huanhuan Liu, Xingda Ju and Han Wang Tags: Research Source Type: research
Shaoxia: a web-based interactive analysis platform for single cell RNA sequencing data
In recent years, Single-cell RNA sequencing (scRNA-seq) is increasingly accessible to researchers of many fields. However, interpreting its data demands proficiency in multiple programming languages and bioinf... (Source: BMC Genomics)
Source: BMC Genomics - April 24, 2024 Category: Genetics & Stem Cells Authors: Weideng Wei, Xiaoqiang Xia, Taiwen Li, Qianming Chen and Xiaodong Feng Tags: Software Source Type: research
Integrated analysis of transcriptome and miRNAome reveals the heat stress response of Pinellia ternata seedlings
Pinellia ternata (Thunb.) Briet., a valuable herb native to China, is susceptible to the “sprout tumble” phenomenon because of high temperatures, resulting in a significant yield reduction. However, the molecular... (Source: BMC Genomics)
Source: BMC Genomics - April 23, 2024 Category: Genetics & Stem Cells Authors: Chen Bo, Mengmeng Liu, Qian You, Xiao Liu, Yanfang Zhu, Yongbo Duan, Dexin Wang, Tao Xue and Jianping Xue Tags: Research Source Type: research
Transcriptomic data reveals the dynamics of terpenoids biosynthetic pathway of fenugreek
Medicinal plants are rich sources for treating various diseases due their bioactive secondary metabolites. Fenugreek (Trigonella foenum-graecum) is one of the medicinal plants traditionally used in human nutritio... (Source: BMC Genomics)
Source: BMC Genomics - April 22, 2024 Category: Genetics & Stem Cells Authors: Sara Lamei Javan, Arman Beyraghdar Kashkooli, AbdolAli Shojaeiyan and Sina Majidian Tags: Research Source Type: research
Genetic and phenotypic analysis of 225 Chinese children with developmental delay and/or intellectual disability using whole-exome sequencing
Developmental delay (DD), or intellectual disability (ID) is a very large group of early onset disorders that affects 1 –2% of children worldwide, which have diverse genetic causes that should be identified. Ge... (Source: BMC Genomics)
Source: BMC Genomics - April 22, 2024 Category: Genetics & Stem Cells Authors: Heqian Ma, Lina Zhu, Xiao Yang, Meng Ao, Shunxiang Zhang, Meizhen Guo, Xuelin Dai, Xiuwei Ma and Xiaoying Zhang Tags: Research Source Type: research
Key mRNAs and lncRNAs of pituitary that affect the reproduction of FecB + + small tail han sheep
The pituitary directly regulates the reproductive process through follicle-stimulating hormone (FSH) and luteinizing hormone (LH). Transcriptomic research on the pituitaries of ewes with different FecB (fecundity... (Source: BMC Genomics)
Source: BMC Genomics - April 22, 2024 Category: Genetics & Stem Cells Authors: Jianqi Yang, Jishun Tang, Xiaoyun He, Ran Di, Xiaosheng Zhang, Jinlong Zhang, Xiaofei Guo, Wenping Hu and Mingxing Chu Tags: Research Source Type: research
scGAL: unmask tumor clonal substructure by jointly analyzing independent single-cell copy number and scRNA-seq data
Accurately deciphering clonal copy number substructure can provide insights into the evolutionary mechanism of cancer, and clustering single-cell copy number profiles has become an effective means to unmask in... (Source: BMC Genomics)
Source: BMC Genomics - April 22, 2024 Category: Genetics & Stem Cells Authors: Ruixiang Li, Fangyuan Shi, Lijuan Song and Zhenhua Yu Tags: Research Source Type: research
Multiple transcriptome analyses reveal mouse testis developmental dynamics
The testes are the organs of gamete production and testosterone synthesis. Up to date, no model system is available for mammalian testicular development, and only few studies have characterized the mouse testi... (Source: BMC Genomics)
Source: BMC Genomics - April 22, 2024 Category: Genetics & Stem Cells Authors: Anqi Chen, Chaoneng Ji, Chengtao Li, Beate Brand-Saberi and Suhua Zhang Tags: Research Source Type: research
GenoMycAnalyzer: a web-based tool for species and drug resistance prediction for Mycobacterium genomes
Drug-resistant tuberculosis (TB) is a major threat to global public health. Whole-genome sequencing (WGS) is a useful tool for species identification and drug resistance prediction, and many clinical laborator... (Source: BMC Genomics)
Source: BMC Genomics - April 20, 2024 Category: Genetics & Stem Cells Authors: Doyoung Kim, Jeong-Ih Shin, In Young Yoo, Sungjin Jo, Jiyon Chu, Woo Young Cho, Seung-Hun Shin, Yeun-Jun Chung, Yeon-Joon Park and Seung-Hyun Jung Tags: Software Source Type: research
Genome-wide identification, characterization and expression of C2H2 zinc finger gene family in Opisthopappus species under salt stress
The C2H2 zinc finger protein family plays important roles in plants. However, precisely how C2H2s function in Opisthopappus (Opisthopappus taihangensis and Opisthopappus longilobus) remains unclear. (Source: BMC Genomics)
Source: BMC Genomics - April 19, 2024 Category: Genetics & Stem Cells Authors: Xiaojuan Zhou, Ting Gao, Yimeng Zhang, Mian Han, Yuexin Shen, Yu Su, Xiaolong Feng, Qi Wu, Genlou Sun and Yiling Wang Tags: Research Source Type: research
GbyE: an integrated tool for genome widely association study and genome selection based on genetic by environmental interaction
The growth and development of organism were dependent on the effect of genetic, environment, and their interaction. In recent decades, lots of candidate additive genetic markers and genes had been detected by ... (Source: BMC Genomics)
Source: BMC Genomics - April 19, 2024 Category: Genetics & Stem Cells Authors: Xinrui Liu, Mingxiu Wang, Jie Qin, Yaxin Liu, Shikai Wang, Shiyu Wu, Ming Zhang, Jincheng Zhong and Jiabo Wang Tags: Research Source Type: research
Sequence characteristics, genetic diversity and phylogenetic analysis of the Cucurbita ficifolia (Cucurbitaceae) chloroplasts genome
Curcubita ficifolia Bouch é (Cucurbitaceae) has high value as a food crop and medicinal plant, and also has horticultural value as rootstock for other melon species. China is home to many different cultivars, but ... (Source: BMC Genomics)
Source: BMC Genomics - April 18, 2024 Category: Genetics & Stem Cells Authors: Shuilian He, Bin Xu, Siyun Chen, Gengyun Li, Jie Zhang, Junqiang Xu, Hang Wu, Xuejiao Li and Zhengan Yang Tags: Research Source Type: research
Genome-wide identification and expression pattern analysis of the Aux/IAA (auxin/indole-3-acetic acid) gene family in alfalfa (Medicago sativa) and the potential functions under drought stress
Auxin/induced-3-acetic acid (Aux/IAA) is an important plant hormone that affects plant growth and resistance to abiotic stresses. Drought stress is a vital factor in reducing plant biomass yield and production... (Source: BMC Genomics)
Source: BMC Genomics - April 18, 2024 Category: Genetics & Stem Cells Authors: Jinqing Zhang, Shuxia Li, Xueqin Gao, Yaling Liu and BingZhe Fu Tags: Research Source Type: research
