Analysis of polygenic selection in purebred and crossbred pig genomes using generation proxy selection mapping
CONCLUSIONS: This work confirms the efficacy and the negligible error rates of the GPSM method in detecting selected loci in commercial pig populations. Our results suggest shared selection objectives and genetic architectures across swine populations. The identified polygenic selection highlights loci that are important to swine production.PMID:37710159 | PMC:PMC10500877 | DOI:10.1186/s12711-023-00836-9 (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 14, 2023 Category: Genetics & Stem Cells Authors: Caleb J Grohmann Caleb M Shull Tamar E Crum Clint Schwab Timothy J Safranski Jared E Decker Source Type: research
Analysis of polygenic selection in purebred and crossbred pig genomes using generation proxy selection mapping
CONCLUSIONS: This work confirms the efficacy and the negligible error rates of the GPSM method in detecting selected loci in commercial pig populations. Our results suggest shared selection objectives and genetic architectures across swine populations. The identified polygenic selection highlights loci that are important to swine production.PMID:37710159 | DOI:10.1186/s12711-023-00836-9 (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 14, 2023 Category: Genetics & Stem Cells Authors: Caleb J Grohmann Caleb M Shull Tamar E Crum Clint Schwab Timothy J Safranski Jared E Decker Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | PMC:PMC10478459 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
CONCLUSIONS: MGBLUP is a useful approach to combine phenotypic, genomic and metabolomic data for predicting breeding values for MQ traits. We believe that our results have significant implications for practical breeding of barley and potentially many other species.PMID:37670243 | DOI:10.1186/s12711-023-00835-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - September 5, 2023 Category: Genetics & Stem Cells Authors: Xiangyu Guo Pernille Sarup Ahmed Jahoor Just Jensen Ole F Christensen Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
CONCLUSIONS: Distinct genetic groups of individuals were revealed within each breed, and in WB these genetic groups reflected population substructure better than studbook or country of origin. Ontology terms associated with immune and inflammatory responses were identified from the signatures of selection between CP genetic groups, and while CP were less inbred than WB, the evidence pointed to a greater degree of recent inbreeding. The ratio of Neb to Ne was similar in CP and WB, indicating the influence of popular sires is similar in CP and WB.PMID:37592264 | PMC:PMC10436415 | DOI:10.1186/s12711-023-00827-w (Source: Genet Sel Evol)
Source: Genet Sel Evol - August 17, 2023 Category: Genetics & Stem Cells Authors: Victoria Lindsay-McGee Enrique Sanchez-Molano Georgios Banos Emily L Clark Richard J Piercy Androniki Psifidi Source Type: research
