Differentiation of some indigenous and exotic trichogrammatids (Hymenoptera: Trichogrammatidae) from India based on Internal transcribed spacer-2 and cytochrome oxidase-I markers and their phylogenetic relationship

This study was carried out to unravel the discrimination success in the two molecular marker loci cytochrome oxidase I (COI) and internal transcribed spacer-2 (ITS-2) region of trichogrammatids. In achieving these objectives, the single specimen of 22 trichogrammatids belonging to 19 species were subjected to DNA extraction, PCR amplification, and sequencing. Additionally, we obtained homologous sequences from GenBank and sequences in BOLD database to understand internal relationships between the trichogrammatids. Bayesian inference phylogenetic analysis conducted with 84 and 76 sequences of COI and ITS-2 loci respectively and studied discrimination among the different species. Based on trees in comparison, we observed that there was a total of 10 and 6 out of 19 species correctly discriminate with COI and ITS-2 respectively. Our result revealed that the ITS-2 gene was less divergent than the COI gene in the majority of species and failed to differentiate all terminal clades. Therefore, we recommend that COI is suitable as the primary DNA barcode locus in trichogrammatids. Overall, we suggest that COI gene has higher discrimination power and can be considered as an appropriate molecular marker for species identification in trichogrammatids.

Source: Biological Control - July 17, 2016 Category: Biology Source Type: research