Exploration of targets and molecular mechanisms of cinnamaldehyde in overcoming fulvestrant-resistant breast cancer: a bioinformatics study

This study aimed to identify the targets and molecular mechanisms of cinnamaldehyde in overcoming fulvestrant-resistant breast cancer using a bioinformatics approach. The microarray data of fulvestrant-resistant and cinnamaldehyde-treated MCF-7 cells were obtained from GSE74391 and GSE85871, respectively, and a total of 310 differentially expressed genes (DEGs) were recovered from these databases. Gene Ontology analysis revealed several DEGs that participated in metabolic processes, responded to a stimulus, were located in the membrane and nucleus, and regulated the molecular functions of the protein and ion binding. Drug association analysis revealed the associations between these DEGs and protein kinase inhibitors. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that the DEGs regulated pathways for cancer, erbB, and MAPK signaling. Genetic alterations for each target gene ranged from 3 to 14% (CDK2, 3%;MDM2, 6%;KRAS, 7%;PIK3R1, 7%;CDH1, 8%;ESR1, 14%). Further investigation was conducted to examine the impact of genetic alterations on the signaling, resulting in BRCA-2012-RTK-RAS-PI(3)K-pathway. This study identified six possible targets of cinnamaldehyde in overcoming fulvestrant-resistant breast cancer, including CDK2, MDM2, KRAS, PIK3R1, CDH1, and ESR1. PI3K/Akt signaling is a possible target of cinnamaldehyde in overcoming fulvestrant-resistant breast cancer. Molecular docking study results showed that cinnamaldehyde could bind to severa...
Source: Network Modeling Analysis in Health Informatics and Bioinformatics - Category: Bioinformatics Source Type: research