Whole genome sequence of Diaporthe capsici, a new pathogen of walnut blight.

Whole genome sequence of Diaporthe capsici, a new pathogen of walnut blight.
Genomics. 2020 May 01;:
Authors: Fang X, Qin K, Li S, Han S, Zhu T, Fang X, Qin K
Abstract
Many fungi in the Diaporthe genus across the world are pathogenic. Diaporthe capsici. is a pathogenic fungus that can infect peppers and walnuts, causing their death. The aim of this study was to develop a genomic resource to provide substantial data and a theoretical basis for research on molecular pathogenesis, transcriptome, proteome, and metabonome of D. capsici. The whole genome of D. capsici was sequenced using the PacBio RSII sequencing platform, and functional annotation was performed using different public databases. The genome was found to be 57.56 Mb in size, with an N50 contig size of 5,171,887 bp, and encodes 14,425 putative genes. This is the first genome-scale assembly and annotation for D. capsici, which is the eighth species in Diaporthe to be sequenced.
PMID: 32371024 [PubMed - as supplied by publisher]

Source: Genomics - April 30, 2020 Category: Genetics & Stem Cells Authors: Fang X, Qin K, Li S, Han S, Zhu T, Fang X, Qin K Tags: Genomics Source Type: research