Finding Community Modules for Brain Networks Combined Uniform Design with Fruit Fly Optimization Algorithm

AbstractThere are a huge amount of neural units in brain networks. Some of the neural units have tight connection and form neural unit modules. These unit modules are helpful to the disease detection and target therapy. A good method can find neural unit modules accurately and effectively. The study proposes a new algorithm to analyze a brain network and obtain its neural unit modules. The proposed algorithm combines the uniform design and the fruit fly optimization algorithm (FOA); therefore, we called it as UFOA. It makes the utmost of their respective merits of the uniform design and the FOA, so as to acquire the feasible solutions scattered uniformly over the vector domain and find the optimal solution as quickly as possible. When compared with other existing methods, FOA and the uniform design are integrated first, and UFOA is first utilized to find unit modules from brain networks. 37 TD resting-state functional MRI brain networks are used to testify the performance of UFOA. The obtained experimental results manifest that UFOA is clearly superior to the other five methods in terms of modularity, and is comparable with the other five methods in terms of conductance. Additionally, the comparative analysis of UFOA and FOA also demonstrates that the uniform design brings benefit to the improvement of UFOA.
Source: Interdisciplinary Sciences, Computational Life Sciences - Category: Bioinformatics Source Type: research