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Use of deep sequencing to profile small RNAs derived from tomato spotted wilt orthotospovirus and hippeastrum chlorotic ringspot orthotospovirus in infected Capsicum annuum
Virus Res. 2021 Dec 12:198648. doi: 10.1016/j.virusres.2021.198648. Online ahead of print.ABSTRACTVirus-derived small RNAs are one of the key factors of RNA silencing in plant defence against viruses. We obtained virus-derived small interfering RNA profiles from Tomato spotted wilt orthotospovirus and Hippeastrum chlorotic ringspot orthotospovirus infected Capsicum annuum XX19 and XY11 by deep sequencing one day after inoculation. The vsiRNAs data were mapped to the TSWV and HCRV genomes, and the results showed that the vsiRNAs measured 19-24 nucleotides in length. Most of the vsiRNAs were mapped to the S segment of the vi...
Source: Virus Research - December 15, 2021 Category: Virology Authors: Xue Gao Zhi-Qiang Jia Hong-Zheng Tao Ye Xu Yong-Zhong Li Ya-Ting Liu Source Type: research
