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Petabyte-Scale Sequence Search: Metagenomics Benchmarking Codeathon Highlights
The National Institutes of Health (NIH) Office of Data Science Strategy (ODSS), the National Library of Medicine’s (NLM’s) National Center for Biotechnology and Information (NCBI), and the Department of Energy’s (DOE’s) Office of Biological and Environmental Research (BER) hosted scientists from around the world for a virtual Petabyte-Scale Sequence Search: Metagenomics Benchmarking Codeathon. The codeathon, … Continue reading Petabyte-Scale Sequence Search: Metagenomics Benchmarking Codeathon Highlights →
Source: NCBI Insights - December 17, 2021 Category: Databases & Libraries Authors: NCBI Staff Tags: What's New Basic Local Alignment Search Tool (BLAST) Codeathon Sequence Read Archive (SRA) Source Type: news
Next Phase of NIH Preprint Pilot Launching Soon
Last month, the National Library of Medicine (NLM)announced plans to extend its NIH Preprint Pilot in PubMed Central (PMC) and PubMed beyond COVID-19 to encompass all preprints reporting on NIH-funded research. The second phase of the pilot, launching later this month, will include preprints supported by an NIH award, contract, or intramural program and posted to aneligible preprint server on or after January 1, 2023.In preparation for the launch of this second phase, we have updated PMC and PubMed site features to help users of these databases incorporate the increased volume of preprints into their discovery workflows. S...
Source: PubMed Central News - January 10, 2023 Category: Databases & Libraries Source Type: news
Second Phase of the NIH Preprint Pilot Launched
Today, we are pleased to announce the launch of the second phase of the NIH Preprint Pilot with the addition of more than 700 new preprint records to PubMed Central (PMC) and PubMed. This second phase expands the scope of the Pilot to include preprints resulting from all NIH-funded research. Eligible preprints are those acknowledging direct support of an NIH award or authored by NIH staff and posted to bioRxiv, medRxiv, arXiv, or Research Square, on or after January 1, 2023. NLM will automatically include the full text of the preprint (as license terms allow) and associated citation information in PMC and PubMed, respectiv...
Source: PubMed Central News - January 30, 2023 Category: Databases & Libraries Source Type: news
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National Preparedness Month begins September 1! Visit the Ready Campaign web page to learn about this year’s theme, “Disasters Don’t Plan Ahead. You Can” and check out the 2017 promotional to...
Source: NN/LM Middle Atlantic Region Blog - August 25, 2017 Category: Databases & Libraries Authors: Hannah Sinemus Tags: Weekly Postings Source Type: news
Evolution of a Search: The Use of Dynamic Twitter Searches During Superstorm Sandy
PLOS: Currents: Disasters, September 26, 2014 This research article, co-authored by National Institutes of Health librarian Alicia Livinski, is an example of collaboration between a library and public health agency developing search strategies to organize and monitor the vast array of information sent out via Twitter during a disaster. http://currents.plos.org/disasters/article/evolution-of-a-search-the-use-of-dynamic-twitter-searches-during-superstorm-sandy/
Source: NN/LM Middle Atlantic Region Blog - October 19, 2014 Category: Databases & Libraries Authors: mjharvey Tags: Disaster / Emergency Preparedness Education News from NLM/NIH Outreach Public Health Technology Technology and Libraries Source Type: news
The search is on for a hepatitis B drug, thanks to a million dollars in NIH grants to SLU
(Saint Louis University) Two grants from the National Institutes of Health will allow Saint Louis University researchers to build on breakthroughs in understanding the hepatitis B virus and begin the search for a drug to cure -- not just halt -- the illness.
Source: EurekAlert! - Medicine and Health - March 25, 2014 Category: Global & Universal Source Type: news
An Integrated Chemical Environment to Support 21st-Century Toxicology
Author Affiliations open
1Integrated Laboratory Systems, Inc. (ILS), Research Triangle Park, North Carolina, USA; 2Sciome, Research Triangle Park, North Carolina, USA; 3Program Operations Branch, National Toxicology Program (NTP), National Institute of Environmental Health Sciences (NIEHS), National Institutes of Health (NIH), Department of Health and Human Services (DHHS), Research Triangle Park, North Carolina, USA; 4NTP Interagency Center for the Evaluation of Alternative Toxicological Methods, NTP, NIEHS, NIH, DHHS, Research Triangle Park, North Carolina, USA
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Source: EHP Research - May 25, 2017 Category: Environmental Health Authors: Terrie Young Tags: Brief Communication Source Type: research
New NIEHS director — the search is on
<div class="rxbodyfield">The National Institutes of Health opens a nationwide search for the next director of NIEHS and the National Toxicology Program. Apply by Dec. 23.</div> (read more)
Source: Environmental Factor - NIEHS Newsletter - December 2, 2019 Category: Environmental Health Source Type: news
Tackling Petabyte Scale Sequence Search Challenges
The volume of biological data being generated by the scientific community is growing exponentially, reflecting technological advances and research activities. This increase in available data has great promise for pushing scientific discovery but also introduces new challenges that scientific communities need to address. The National Institutes of Health’s (NIH) Sequence Read Archive (SRA), which is … Continue reading Tackling Petabyte Scale Sequence Search Challenges →
Source: NCBI Insights - August 9, 2021 Category: Databases & Libraries Authors: NCBI Staff Tags: What's New Sequence Read Archive (SRA) STRIDES Source Type: news
New NIEHS director — the search is on
<img width="100" src="https://factor.niehs.nih.gov/sites/niehs-factor/files/styles/large/public/2019/12/feature/3-feature-director/thumb881462.jpg?itok=hyMTYjdC" /><br /><p>The National Institutes of Health opens a nationwide search for the next director of NIEHS and the National Toxicology Program. Apply by Dec. 23.</p>
(read more)
Source: Environmental Factor - NIEHS Newsletter - February 3, 2023 Category: Environmental Health Source Type: news
Scientists use AI to identify likely drug targets in search for Alzheimer ' s cure
Scientists use AI to identify likely drug targets in search for Alzheimer's cure
A team led by a University of Arizona College of Medicine – Tucson scientist harnesses artificial intelligence to trace the path from a healthy brain cell to one afflicted by Alzheimer ' s disease.
Anna C. Christensen
Today
College of Medicine – TucsonRui-Chang_khp-web.jpg
Rui Chang, an associate professor of neurology, is leading a team at the College of Medicine – Tucson that uses artificial intelligence to trace the molecular path of the development of Alzheimer's disease.HealthCollege of Medicine - TucsonDeterminationE...
Source: The University of Arizona: Health - May 15, 2023 Category: Universities & Medical Training Authors: mittank Source Type: research
NLM ’s LitVar 2.0 Provides More Accurate & Comprehensive Way to Search for Genetic Variants in Biomedical Literature
A team of researchers from the National Library of Medicine (NLM) at the National Institutes of Health (NIH) and the Broad Institute developed an improved web-based system, LitVar 2.0, to help researchers and clinicians search for genetic variants and related information in the biomedical literature. A paper about this powerful LitVar 2.0 system was published in Nature Genetics.
Source: NLM General Announcements - June 7, 2023 Category: Databases & Libraries Source Type: news
RNA-seq research landscape in Africa: systematic review reveals disparities and opportunities
Eur J Med Res. 2023 Jul 22;28(1):244. doi: 10.1186/s40001-023-01206-3.ABSTRACTRNA sequencing has emerged as the standard method for transcriptome profiling of several human diseases. We performed a systematic review detailing the state of RNA-seq analyses in Africa from its inception till February 2022. Our goal was to provide an update on the state of RNA-seq analyses in Africa, including research gaps, funding information, participants information, authorship and collaborations. Following the PRISMA guidelines, we performed an exhaustive literature search for RNA-seq studies conducted in Africa, using PubMed, Scopus and ...
Source: Biomed Res - July 21, 2023 Category: Research Authors: Albert Doughan Wisdom Adingo Samson Pandam Salifu Source Type: research
