Parentage exclusion of close relatives in haplodiploid species
In this study we derive equations for the exclusion probability of maternity of a haploid male when multiple mother candidates (workers or queens) are unrelated or fullsibs to the mother. The usefulness of the equations is exemplified by numerical examples, and the results are discussed in the context of the study of worker reproductivity in eusocial haplodiploid species. The results are especially valuable for an optimal experimental design in determining sampling intensities (e.g. number of markers and number of individuals) to achieve satisfactory statistical power of a parentage analysis in investigating workers' repro...
Source: Theoretical Population Biology - August 28, 2023 Category: Biology Authors: Jinliang Wang Andrew F G Bourke Source Type: research
Parentage exclusion of close relatives in haplodiploid species
In this study we derive equations for the exclusion probability of maternity of a haploid male when multiple mother candidates (workers or queens) are unrelated or fullsibs to the mother. The usefulness of the equations is exemplified by numerical examples, and the results are discussed in the context of the study of worker reproductivity in eusocial haplodiploid species. The results are especially valuable for an optimal experimental design in determining sampling intensities (e.g. number of markers and number of individuals) to achieve satisfactory statistical power of a parentage analysis in investigating workers' repro...
Source: Theoretical Population Biology - August 28, 2023 Category: Biology Authors: Jinliang Wang Andrew F G Bourke Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
Recoverability of ancestral recombination graph topologies
Theor Popul Biol. 2023 Aug 4:S0040-5809(23)00049-7. doi: 10.1016/j.tpb.2023.07.004. Online ahead of print.ABSTRACTRecombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species. Reconstructing genealogies in the presence of recombination from sequencing data is a very challenging problem, as this relies on mutations having occurred on the correct lineages in order to detect the recombination and resolve the ordering of coalescence events in the local trees. We investigate the probability of reconstructing the true topology of ancestral recombination graphs (AR...
Source: Theoretical Population Biology - August 6, 2023 Category: Biology Authors: Elizabeth Hayman Anastasia Ignatieva Jotun Hein Source Type: research
