17. Djerba: A modular system to generate clinical genome interpretation reports for cancer

We present Djerba, a software package for the translation of bioinformatic pipeline output from individual tumor genomes and transcriptomes into clinical reports for precision cancer medicine in a CAP/CLIA/ACD accredited laboratory. Specific use cases are clinical genome and transcriptome sequencing for therapeutic assignment; along with cell-free DNA sequencing using targeted panels and whole genome sequencing, for early cancer and minimal residual disease detection.The modular structure of Djerba enables it to process a wide variety of data, with reports customized for available inputs; rapid development of new reporting modes; and openness to collaboration between multiple researchers and institutions.
Source: Cancer Genetics and Cytogenetics - Category: Genetics & Stem Cells Authors: Source Type: research