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Halomontanus rarus gen. nov., sp. nov., a novel halophilic archaeon of the family Natrialbaceae from salt lakes on the Qinghai-Xizang Plateau
Syst Appl Microbiol. 2024 Feb 24;47(2-3):126500. doi: 10.1016/j.syapm.2024.126500. Online ahead of print.ABSTRACTTwo halophilic archaeal strains TS33T and KZCA124 were isolated from two distant salt lakes on the Qinghai-Xizang Plateau, respectively. Culture-independent analysis indicated that these two strains were original inhabitants but low abundant taxa in respective salt lakes. Strains TS33T and KZCA124 were able to grow at 20-60 °C (optimum were 42 and 35 °C, respectively), with 0.9-4.8 M NaCl (optimum were 3.0 and 2.6 M, respectively), with 0-0.7 M MgCl2 (optimum, 0.3 M) and at pH 5.0-9.5 (optimum were pH 7.5 and ...
Source: Systematic and Applied Microbiology - February 28, 2024 Category: Microbiology Authors: Ya-Ling Mao Bei-Bei Wang Xue-Meng Yin Jing Hou Heng-Lin Cui Source Type: research

Halomontanus rarus gen. nov., sp. nov., a novel halophilic archaeon of the family Natrialbaceae from salt lakes on the Qinghai-Xizang Plateau
Syst Appl Microbiol. 2024 Feb 24;47(2-3):126500. doi: 10.1016/j.syapm.2024.126500. Online ahead of print.ABSTRACTTwo halophilic archaeal strains TS33T and KZCA124 were isolated from two distant salt lakes on the Qinghai-Xizang Plateau, respectively. Culture-independent analysis indicated that these two strains were original inhabitants but low abundant taxa in respective salt lakes. Strains TS33T and KZCA124 were able to grow at 20-60 °C (optimum were 42 and 35 °C, respectively), with 0.9-4.8 M NaCl (optimum were 3.0 and 2.6 M, respectively), with 0-0.7 M MgCl2 (optimum, 0.3 M) and at pH 5.0-9.5 (optimum were pH 7.5 and ...
Source: Systematic and Applied Microbiology - February 28, 2024 Category: Microbiology Authors: Ya-Ling Mao Bei-Bei Wang Xue-Meng Yin Jing Hou Heng-Lin Cui Source Type: research

Halomontanus rarus gen. nov., sp. nov., a novel halophilic archaeon of the family Natrialbaceae from salt lakes on the Qinghai-Xizang Plateau
Syst Appl Microbiol. 2024 Feb 24;47(2-3):126500. doi: 10.1016/j.syapm.2024.126500. Online ahead of print.ABSTRACTTwo halophilic archaeal strains TS33T and KZCA124 were isolated from two distant salt lakes on the Qinghai-Xizang Plateau, respectively. Culture-independent analysis indicated that these two strains were original inhabitants but low abundant taxa in respective salt lakes. Strains TS33T and KZCA124 were able to grow at 20-60 °C (optimum were 42 and 35 °C, respectively), with 0.9-4.8 M NaCl (optimum were 3.0 and 2.6 M, respectively), with 0-0.7 M MgCl2 (optimum, 0.3 M) and at pH 5.0-9.5 (optimum were pH 7.5 and ...
Source: Systematic and Applied Microbiology - February 28, 2024 Category: Microbiology Authors: Ya-Ling Mao Bei-Bei Wang Xue-Meng Yin Jing Hou Heng-Lin Cui Source Type: research

Description of a new genus of the Pectobacteriaceae family isolated from water in coastal brackish wetlands of the French Camargue region, Prodigiosinella gen. nov., including the new species Prodigiosinella aquatilis sp. nov
Syst Appl Microbiol. 2024 Feb 21;47(2-3):126497. doi: 10.1016/j.syapm.2024.126497. Online ahead of print.ABSTRACTThe Pectobacteriaceae family comprises plant pathogens able to provoke diverse diseases, including plant maceration due to the production of pectinases disrupting the plant cell wall. To better understand their diversity, a survey of pectinolytic bacteria was performed in brackish lakes of the French region La Camargue near the Mediterranean Sea. The genome of six atypical isolates was sequenced; their size is around 4.8 to 5.0 Mb, including a plasmid of 59 to 61 kb; their G+C values range from 49.1 to 49.3 mol%...
Source: Systematic and Applied Microbiology - February 25, 2024 Category: Microbiology Authors: Nicole Hugouvieux-Cotte-Pattat Jean-Pierre Flandrois J érôme Briolay Sylvie Reverchon C éline Brochier-Armanet Source Type: research

Description of a new genus of the Pectobacteriaceae family isolated from water in coastal brackish wetlands of the French Camargue region, Prodigiosinella gen. nov., including the new species Prodigiosinella aquatilis sp. nov
Syst Appl Microbiol. 2024 Feb 21;47(2-3):126497. doi: 10.1016/j.syapm.2024.126497. Online ahead of print.ABSTRACTThe Pectobacteriaceae family comprises plant pathogens able to provoke diverse diseases, including plant maceration due to the production of pectinases disrupting the plant cell wall. To better understand their diversity, a survey of pectinolytic bacteria was performed in brackish lakes of the French region La Camargue near the Mediterranean Sea. The genome of six atypical isolates was sequenced; their size is around 4.8 to 5.0 Mb, including a plasmid of 59 to 61 kb; their G+C values range from 49.1 to 49.3 mol%...
Source: Systematic and Applied Microbiology - February 25, 2024 Category: Microbiology Authors: Nicole Hugouvieux-Cotte-Pattat Jean-Pierre Flandrois J érôme Briolay Sylvie Reverchon C éline Brochier-Armanet Source Type: research

Description of a new genus of the Pectobacteriaceae family isolated from water in coastal brackish wetlands of the French Camargue region, Prodigiosinella gen. nov., including the new species Prodigiosinella aquatilis sp. nov
Syst Appl Microbiol. 2024 Feb 21;47(2-3):126497. doi: 10.1016/j.syapm.2024.126497. Online ahead of print.ABSTRACTThe Pectobacteriaceae family comprises plant pathogens able to provoke diverse diseases, including plant maceration due to the production of pectinases disrupting the plant cell wall. To better understand their diversity, a survey of pectinolytic bacteria was performed in brackish lakes of the French region La Camargue near the Mediterranean Sea. The genome of six atypical isolates was sequenced; their size is around 4.8 to 5.0 Mb, including a plasmid of 59 to 61 kb; their G+C values range from 49.1 to 49.3 mol%...
Source: Systematic and Applied Microbiology - February 25, 2024 Category: Microbiology Authors: Nicole Hugouvieux-Cotte-Pattat Jean-Pierre Flandrois J érôme Briolay Sylvie Reverchon C éline Brochier-Armanet Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Description of the first cultured representative of "Candidatus Synoicihabitans" genus, isolated from deep-sea sediment of South China Sea
In this study we describe the first cultured representative of Candidatus Synoicihabitans genus, a novel strain designated as LMO-M01T, isolated from deep-sea sediment of South China Sea. This bacterium is a facultative aerobe, Gram-negative, non-motile, and has a globular-shaped morphology, with light greenish, small, and circular colonies. Analysis of the 16S rRNA gene sequences of strain LMO-M01T showed less than 93% similarity to its closest cultured members. Furthermore, employing advanced phylogenomic methods such as comparative genome analysis, average nucleotide identity (ANI), average amino acids identity (AAI), a...
Source: Systematic and Applied Microbiology - February 8, 2024 Category: Microbiology Authors: Tariq Ahmad Sidra Erum Ishaq Lewen Liang Jialin Hou Ruize Xie Yijing Dong Tiantian Yu Fengping Wang Source Type: research

Multiphasic investigations imply transfer of orange-/red-pigmented strains of the bean pathogen Curtobacterium flaccumfaciens pv. flaccumfaciens to a new species as C. aurantiacum sp. nov., elevation of the poinsettia pathogen C. flaccumfaciens pv. poinsettiae to the species level as C. Poinsettiae sp. nov., and synonymy of C. albidum with C. citreum
In this study, phenotypic features and DNA similarity indexes were investigated among all C. flaccumfaciens members. Results showed that the C. flaccumfaciens pv. poinsettiae strains causing bacterial canker of Euphorbia pulcherrima in the USA as well as the orange-/red-pigmented strains of C. flaccumfaciens pv. flaccumfaciens pathogenic on dry beans in Iran are too distinct from each other and from the type strain of the species to be considered members of C. flaccumfaciens. Hence, the latter two groups were elevated at the species level as C. poinsettiae sp. nov. (ATCC 9682T = CFBP 2403T = ICMP 2566T = LMG 3715T = NCPPB ...
Source: Systematic and Applied Microbiology - February 7, 2024 Category: Microbiology Authors: Ebrahim Osdaghi S Mohsen Taghavi Mozhde Hamidizade Mehdi Kariminejhad Amal Fazliarab Habibeh Hajian Maleki Steve Baeyen Geraldine Taghouti Marie-Agnes Jacques Johan Van Vaerenbergh Perrine Portier Source Type: research