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RNAcode_Web - Convenient identification of evolutionary conserved protein coding regions
J Integr Bioinform. 2023 Aug 25. doi: 10.1515/jib-2022-0046. Online ahead of print.ABSTRACTThe differentiation of regions with coding potential from non-coding regions remains a key task in computational biology. Methods such as RNAcode that exploit patterns of sequence conservation for this task have a substantial advantage in classification accuracy in particular for short coding sequences, compared to methods that rely on a single input sequence. However, they require sequence alignments as input. Frequently, suitable multiple sequence alignments are not readily available and are tedious, and sometimes difficult to cons...
Source: Journal of integrative bioinformatics - August 24, 2023 Category: Bioinformatics Authors: John Anders Peter F Stadler Source Type: research