Learning Multimodal Networks From Heterogeneous Data for Prediction of lncRNA & #x2013;miRNA Interactions
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 8, 2020 Category: Bioinformatics Source Type: research

Efficient Classification of Hot Spots and Hub Protein Interfaces by Recursive Feature Elimination and Gradient Boosting
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 8, 2020 Category: Bioinformatics Source Type: research

< italic>RFCM < sup>3 < /sup> < /italic>: Computational Method for Identification of miRNA-mRNA Regulatory Modules in Cervical Cancer
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 8, 2020 Category: Bioinformatics Source Type: research

PASA: Identifying More Credible Structural Variants of Hedou12
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Deep Robust Framework for Protein Function Prediction Using Variable-Length Protein Sequences
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

SNeCT: Scalable Network Constrained Tucker Decomposition for Multi-Platform Data Profiling
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Identification of Short Exons Disunited by a Short Intron in Eukaryotic DNA Regions
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Using Weighted Extreme Learning Machine Combined With Scale-Invariant Feature Transform to Predict Protein-Protein Interactions From Protein Evolutionary Information
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Jointly Integrating VCF-Based Variants and OWL-Based Biomedical Ontologies in MongoDB
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

A Novel Approach to Detecting Epistasis using Random Sampling Regularisation
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

An Efficient Algorithm for Identifying Mutated Subnetworks Associated with Survival in Cancer
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

A Network-Based Comparison Between Molecular Apocrine Breast Cancer Tumor and Basal and Luminal Tumors by Joint Graphical Lasso
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

MCNF: A Novel Method for Cancer Subtyping by Integrating Multi-Omics and Clinical Data
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

RNA-Protein Binding Sites Prediction via Multi Scale Convolutional Gated Recurrent Unit Networks
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Capsule Network Based Modeling of Multi-omics Data for Discovery of Breast Cancer-Related Genes
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Predicting DNA Methylation States with Hybrid Information Based Deep-Learning Model
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

BRWMDA:Predicting Microbe-Disease Associations Based on Similarities and Bi-Random Walk on Disease and Microbe Networks
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

CaverDock: A Novel Method for the Fast Analysis of Ligand Transport
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Deep Collaborative Filtering for Prediction of Disease Genes
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Sparse Reconstruction of Glucose Fluxes Using Continuous Glucose Monitors
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Modeling Variability in Populations of Cells Using Approximated Multivariate Distributions
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

A Novel Edge Effect Detection Method for Real-Time Cellular Analyzer Using Functional Principal Component Analysis
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Integration of Imaging (epi)Genomics Data for the Study of Schizophrenia Using Group Sparse Joint Nonnegative Matrix Factorization
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Oscillatory Dynamics of p53-Mdm2 Circuit in Response to DNA Damage Caused by Ionizing Radiation
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Guest Editorial for Special Section on the 14th International Conference on Intelligent Computing (ICIC)
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Constructive Prediction of Potential RNA Aptamers for a Protein Target
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Capsule Network for Predicting RNA-Protein Binding Preferences Using Hybrid Feature
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Screening Pipeline for Flavivirus Based Inhibitors for Zika Virus NS1
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Seq2seq Fingerprint with Byte-Pair Encoding for Predicting Changes in Protein Stability upon Single Point Mutation
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Causal Disturbance Analysis: A Novel Graph Centrality Based Method for Pathway Enrichment Analysis
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Single-Cell RNA Sequencing Data Interpretation by Evolutionary Multiobjective Clustering
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

The Use of Informed Priors in Biclustering of Gene Expression with the Hierarchical Dirichlet Process
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

PredictFP2: A New Computational Model to Predict Fusion Peptide Domain in All Retroviruses
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Variable Neighborhood Search for Partitioning Sparse Biological Networks into the Maximum Edge-Weighted < inline-formula> < tex-math notation="LaTeX">$k$ < /tex-math> < alternatives> < mml:math> < mml:mi>k < /mml:mi> < /mml:math> < inline-graphic xlink:href="grbic-ieq1-2898189.gif"/> < /alternatives> < /inline-formula>-Plexes
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

An Effective Solution for Large Scale Single Machine Total Weighted Tardiness Problem using Lunar Cycle Inspired Artificial Bee Colony Algorithm
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - October 7, 2020 Category: Bioinformatics Source Type: research

Accelerating Sequence Alignments Based on FM-Index Using the Intel KNL Processor
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Understanding Protein Networks Using Vester & #x0027;s Sensitivity Model
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

NTSHMDA: Prediction of Human Microbe-Disease Association Based on Random Walk by Integrating Network Topological Similarity
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Potential Effect of Tobacco Consumption through Smoking and Chewing Tobacco on IL1beta Protein Expression in Chronic Periodontitis Patients: In Silico Molecular Docking Study
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Two New Heuristic Methods for Protein Model Quality Assessment
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

nAPOLI: A Graph-Based Strategy to Detect and Visualize Conserved Protein-Ligand Interactions in Large-Scale
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

On the Unreported-Profile-is-Negative Assumption for Predictive Cheminformatics
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Visual Life Sciences Workflow Design Using Distributed and Heterogeneous Resources
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Cache Friendly Optimisation of de Bruijn Graph Based Local Re-Assembly in Variant Calling
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Feed-Forward and Feedback Control in Astrocytes for Ca < inline-formula> < tex-math notation="LaTeX">$^{2+}$ < /tex-math> < alternatives> < mml:math> < mml:msup> < mml:mrow/> < mml:mrow> < mml:mn>2 < /mml:mn> < mml:mo>+ < /mml:mo> < /mml:mrow> < /mml:msup> < /mml:math> < inline-graphic xlink:href="taynnanbarros-ieq1-2887222.gif"/> < /alternatives> < /inline-formula>-Based Molecular Communications Nanonetworks
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Introducing Heuristic Information Into Ant Colony Optimization Algorithm for Identifying Epistasis
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Low-Rank Joint Subspace Construction for Cancer Subtype Discovery
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Prediction of TF-Binding Site by Inclusion of Higher Order Position Dependencies
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Gene Expression Classification of Lung Adenocarcinoma into Molecular Subtypes
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research

Identifying TF Binding Motifs from a Partial Set of Target Genes and its Application to Regulatory Network Inference
(Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics)
Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics - August 11, 2020 Category: Bioinformatics Source Type: research