Mapping the annotations of a query sequence on a BLAST hit, my notebook.

This post is the answer to my own question on biostar "BLASTN / TBLASTN : mapping the features of the query to the hit.". I wrote a java program to map the annotations of a sequence to the Hit of a Blast result. The tool is available on github at https://github.com/lindenb/jvarkit.For example, say you want to map the features of the Uniprot record for Rotavirus NSP3 (http://www.uniprot.org/

Source: YOKOFAKUN - July 9, 2013 Category: Bioinformaticians Authors: Pierre Lindenbaum Source Type: blogs