Lokatt: a hybrid DNA nanopore basecaller with an explicit duration hidden Markov model and a residual LSTM network
Basecalling long DNA sequences is a crucial step in nanopore-based DNA sequencing protocols. In recent years, the CTC-RNN model has become the leading basecalling model, supplanting preceding hidden Markov mod...
Source: BMC Bioinformatics - Category: Bioinformatics Authors: Xuechun Xu, Nayanika Bhalla, Patrik St åhl and Joakim Jaldén Tags: Research Source Type: research
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