scLM: Automatic Detection of Consensus Gene Clusters Across Multiple Single-cell Datasets
Publication date: Available online 24 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Qianqian Song, Jing Su, Lance D. Miller, Wei Zhang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 26, 2020 Category: Bioinformatics Source Type: research

SeSaMe: Metagenome Sequence Classification of Arbuscular Mycorrhizal Fungi-associated Microorganisms
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): JeeEun Kang, Antonio Ciampi, Mohamed Hijri (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

SeSaMe PS Function: Functional Analysis of the Whole Metagenome Sequencing Data of the Arbuscular Mycorrhizal Fungi
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jee Eun Kang, Antonio Ciampi, Mohamed Hijri (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

mrMLM v4.0: An R Platform for Multi-locus Genome-wide Association Studies
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Ya-Wen Zhang, Cox Lwaka Tamba, Yang-Jun Wen, Pei Li, Wen-Long Ren, Yuan-Li Ni, Jun Gao, Yuan-Ming Zhang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

Global Analysis of Gene Expression Profiles Provides Novel Insights into the Development and Evolution of the Large Crustacean Eriocheir sinensis
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jun Wang, Xiaowen Chen, Funan He, Xiao Song, Shu Huang, Wucheng Yue, Yipei Chen, Zhixi Su, Chenghui Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

Denoising Autoencoder, a Deep Learning Algorithm, Aids the Identification of a Novel Molecular Signature of Lung Adenocarcinoma
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jun Wang, Xueying Xie, Junchao Shi, Wenjun He, Qi Chen, Liang Chen, Wanjun Gu, Tong Zhou (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

Exploring Potential Signals of Selection for Disordered Residues in Prokaryotic and Eukaryotic Proteins
Publication date: Available online 18 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Arup Panda, Tamir Tuller (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 19, 2020 Category: Bioinformatics Source Type: research

The mRNA Binding Proteome of Proliferating and Differentiated Muscle Cells
Publication date: Available online 16 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Monika Hiller, Miriam Geissler, George Janssen, Peter van Veelen, Annemieke Aartsma-Rus, Pietro Spitali (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 16, 2020 Category: Bioinformatics Source Type: research

Tissue-specific Gene Expression Changes Are Associated with Aging in Mice
Publication date: Available online 11 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Akash Srivastava, Emanuel Barth, Maria A. Ermolaeva, Madlen Guenther, Christiane Frahm, Manja Marz, Otto W. Witte (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 12, 2020 Category: Bioinformatics Source Type: research

Transcriptomic Profiling of Human Pluripotent Stem Cell-derived Retinal Pigment Epithelium over Time
Publication date: Available online 8 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Grace E. Lidgerwood, Anne Senabouth, Casey J.A. Smith-Anttila, Vikkitharan Gnanasambandapillai, Dominik C. Kaczorowski, Daniela Amann-Zalcenstein, Erica L. Fletcher, Shalin H. Naik, Alex W. Hewitt, Joseph E. Powell, Alice Pébay (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 9, 2020 Category: Bioinformatics Source Type: research

G9a/GLP-Sensitivity of H3K9me2 Demarcates Two Types of Genomic Compartments
Publication date: Available online 5 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zixiang Yan, Luzhang Ji, Xiangru Huo, Qianfeng Wang, Yuwen Zhang, Bo Wen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 5, 2020 Category: Bioinformatics Source Type: research

Transcriptomic and Proteomic Analysis of Mannitol-metabolism-associated Genes in Saccharina japonica
Publication date: Available online 25 November 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Shan Chi, Guoliang Wang, Tao Liu, Xumin Wang, Cui Liu, Yuemei Jin, Hongxin Yin, Xin Xu, Jun Yu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - November 26, 2020 Category: Bioinformatics Source Type: research

m6A Regulates Liver Metabolic Disorders and Hepatogenous Diabetes
Publication date: Available online 5 November 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yuhuan Li, Qingyang Zhang, Guanshen Cui, Fang Zhao, Xin Tian, Bao-Fa Sun, Ying Yang, Wei Li (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - November 6, 2020 Category: Bioinformatics Source Type: research

Comparative Genome Analysis of Scutellaria baicalensis and Scutellaria barbata Reveals the Evolution of Active Flavonoid Biosynthesis
Publication date: Available online 4 November 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zhichao Xu, Ranran Gao, Xiangdong Pu, Rong Xu, Jiyong Wang, Sihao Zheng, Yan Zeng, Jun Chen, Chunnian He, Jingyuan Song (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - November 4, 2020 Category: Bioinformatics Source Type: research

Paleo-polyploidization in Lycophytes
Publication date: Available online 4 November 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jinpeng Wang, Jigao Yu, Pengchuan Sun, Chao Li, Xiaoming Song, Tianyu Lei, Yuxian Li, Jiaqing Yuan, Sangrong Sun, Hongling Ding, Xueqian Duan, Shaoqi Shen, Yanshuang Shen, Jing Li, Fanbo Meng, Yangqin Xie, Jianyu Wang, Yue Hou, Jin Zhang, Xianchun Zhang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - November 4, 2020 Category: Bioinformatics Source Type: research