ETumorMetastasis: A Network-based Algorithm Predicts Clinical Outcomes Using Whole-exome Sequencing Data of Cancer Patients
Publication date: Available online 11 February 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jean-Sébastien Milanese, Chabane Tibiche, Naif Zaman, Jinfeng Zou, Pengyong Han, Zhigang Meng, Andre Nantel, Arnaud Droit, Edwin Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - February 11, 2021 Category: Bioinformatics Source Type: research

Global Profiling of 2-hydroxyisobutyrylome in Common Wheat
Publication date: Available online 11 February 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Ning Zhang, Lingran Zhang, Linjie Li, Junyou Geng, Lei Zhao, Yan Ren, Zhongdong Dong, Feng Chen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - February 11, 2021 Category: Bioinformatics Source Type: research

GTB-PPI: Predict Protein–protein Interactions Based on L1-regularized Logistic Regression and Gradient Tree Boosting
Publication date: Available online 27 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Bin Yu, Cheng Chen, Hongyan Zhou, Bingqiang Liu, Qin Ma (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 29, 2021 Category: Bioinformatics Source Type: research

Single-cell RNA Sequencing Deciphers Immune Landscape of Human Recurrent Miscarriage
Publication date: Available online 19 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Chunyu Huang, Yong Zeng, Wenwei Tu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 20, 2021 Category: Bioinformatics Source Type: research

Single-cell Immune Landscape of Human Recurrent Miscarriage
Publication date: Available online 19 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Feiyang Wang, Wentong Jia, Mengjie Fan, Xuan Shao, Zhilang Li, Yongjie Liu, Yeling Ma, Yu-Xia Li, Rong Li, Qiang Tu, Yan-Ling Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 20, 2021 Category: Bioinformatics Source Type: research

Kinase–substrate Edge Biomarkers Provide A More Accurate Prognostic Prediction in ER-negative Breast Cancer
Publication date: Available online 13 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yidi Sun, Chen Li, Shichao Pang, Qianlan Yao, Luonan Chen, Yixue Li, Rong Zeng (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 13, 2021 Category: Bioinformatics Source Type: research

MicroPhenoDB Associates Metagenomic Data with Pathogenic Microbes, Microbial Core Genes, and Human Disease Phenotypes
Publication date: Available online 6 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Guocai Yao, Wenliang Zhang, Minglei Yang, Huan Yang, Jianbo Wang, Haiyue Zhang, Lai Wei, Zhi Xie, Weizhong Li (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 6, 2021 Category: Bioinformatics Source Type: research

Different Gene Networks are Disturbed by Zika Virus Infection in a Mouse Microcephaly Model
Publication date: Available online 6 January 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yafei Chang, Yisheng Jiang, Cui Li, Qin Wang, Feng Zhang, Cheng-Feng Qin, Qing-Feng Wu, Jing Li, Zhiheng Xu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - January 6, 2021 Category: Bioinformatics Source Type: research

Pooled Plasmid Sequencing Reveals the Relationship Between Mobile Genetic Elements and Antimicrobial Resistance Genes in Clinically Isolated Klebsiella pneumoniae
Publication date: Available online 30 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yan Jiang, Yanfei Wang, Xiaoting Hua, Yue Qu, Anton Y. Peleg, Yunsong Yu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 30, 2020 Category: Bioinformatics Source Type: research

Landscape and Dynamics of the Transcriptional Regulatory Network During Natural Killer Cell Differentiation
Publication date: Available online 30 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Kun Li, Yang Wu, Young Li, Qiaoni Yu, Zhigang Tian, Haiming Wei, Kun Qu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 30, 2020 Category: Bioinformatics Source Type: research

Large-scale Proteomic and Phosphoproteomic Analysis of Maize Seedling Leaves During De-etiolation
Publication date: Available online 30 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zhi-Fang Gao, Zhuo Shen, Qing Chao, Zhen Yan, Xuan-Liang Ge, Tiancong Lu, Haiyan Zheng, Chun-Rong Qian, Bai-Chen Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 30, 2020 Category: Bioinformatics Source Type: research

The Global Landscape of SARS-CoV-2 Genomes, Variants, and Haplotypes in 2019nCoVR
Publication date: Available online 28 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Shuhui Song, Lina Ma, Dong Zou, Dongmei Tian, Cuiping Li, Junwei Zhu, Meili Chen, Anke Wang, Yingke Ma, Mengwei Li, Xufei Teng, Ying Cui, Guangya Duan, Mochen Zhang, Tong Jin, Chengmin Shi, Zhenglin Du, Yadong Zhang, Chuandong Liu, Rujiao Li (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 29, 2020 Category: Bioinformatics Source Type: research

The Wolfiporia cocos Genome and Transcriptome Shed Light on the Formation of Its Edible and Medicinal Sclerotium
Publication date: Available online 24 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Hongmei Luo, Jun Qian, Zhichao Xu, Wanjing Liu, Lei Xu, Ying Li, Jiang Xu, Jianhong Zhang, Xiaolan Xu, Chang Liu, Liu He, Jianqin Li, Chao Sun, Francis Martin, Jingyuan Song, Shilin Chen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 26, 2020 Category: Bioinformatics Source Type: research

Antidiabetic Effects of Gegen Qinlian Decoction via the Gut Microbiota Are Attributable to Its Key Ingredient Berberine
Publication date: Available online 24 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xizhan Xu, Zezheng Gao, Fuquan Yang, Yingying Yang, Liang Chen, Lin Han, Na Zhao, Jiayue Xu, Xinmiao Wang, Yue Ma, Lian Shu, Xiaoxi Hu, Na Lyu, Yuanlong Pan, Baoli Zhu, Linhua Zhao, Xiaolin Tong, Jun Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 26, 2020 Category: Bioinformatics Source Type: research

Evaluation of Cell Type Annotation R Packages on Single-cell RNA-seq Data
Publication date: Available online 24 December 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Qianhui Huang, Yu Liu, Yuheng Du, Lana X. Garmire (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - December 26, 2020 Category: Bioinformatics Source Type: research