Stage-specific expression patterns of ER stress-related molecules in mice molars: Implications for tooth development
Publication date: Available online 3 August 2020Source: Gene Expression PatternsAuthor(s): Yam Prasad Aryal, Eui-Seon Lee, Tae-Young Kim, Shijin Sung, Ji-Youn Kim, Seo-Young An, Jae-Kwang Jung, Jung-Hong Ha, Jo-Young Suh, Hitoshi Yamamoto, Wern-Joo Sohn, Sung-Won Cho, Youngkyun Lee, Chang-Hyeon An, Jae-Young Kim (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - August 4, 2020 Category: Genetics & Stem Cells Source Type: research

Quantitative gene expression dynamics of key placode signalling factors in the embryonic chicken scleral ossicle system
Publication date: Available online 2 August 2020Source: Gene Expression PatternsAuthor(s): Jennifer L. Giffin, Tamara A. Franz-Odendaal (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - August 3, 2020 Category: Genetics & Stem Cells Source Type: research

Identification and functional analysis of the doublesex gene in the redclaw crayfish, Cherax quadricarinatus
Publication date: Available online 24 July 2020Source: Gene Expression PatternsAuthor(s): Jianbo Zheng, Lina Cai, Yongyi Jia, Meili Chi, Shun Cheng, Shili Liu, Fei Li, Zhimi Gu (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 25, 2020 Category: Genetics & Stem Cells Source Type: research

TWIST1 upregulates matrix metalloproteinase (MMP) genes family in esophageal squamous carcinoma cells
Publication date: September 2020Source: Gene Expression Patterns, Volume 37Author(s): Sima Ardalan Khales, Mohammad Reza Abbaszadegan, Ahmad Majd, Mohammad Mahdi Forghanifard (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 25, 2020 Category: Genetics & Stem Cells Source Type: research

TWIST1 upregulates matrix metalloproteinase (MMP) gene family in esophageal squamous carcinoma cells
Publication date: Available online 22 July 2020Source: Gene Expression PatternsAuthor(s): Sima Ardalan Khales, Mohammad Reza Abbaszadegan, Ahmad Majd, Mohammad Mahdi Forghanifard (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 23, 2020 Category: Genetics & Stem Cells Source Type: research

Myelopoiesis specific gene expression profiling in human CD34+ hematopoietic stem cells
Publication date: Available online 22 July 2020Source: Gene Expression PatternsAuthor(s): Madhuri Joshi, Gurudutta Gangenahalli (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 22, 2020 Category: Genetics & Stem Cells Source Type: research

Expression patterns of activating transcription factor 5 (atf5a and atf5b) in zebrafish
Publication date: Available online 11 July 2020Source: Gene Expression PatternsAuthor(s): Roberto Rodríguez-Morales, Viveca Vélez-Negrón, Aranza Torrado-Tapias, Gaurav Varshney, Martine Behra (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 11, 2020 Category: Genetics & Stem Cells Source Type: research

DOF, MYB and TCP transcription factors: Their possible roles on barley germination and seedling establishment
Publication date: Available online 27 June 2020Source: Gene Expression PatternsAuthor(s): Merve Seven, Hulya Akdemir (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - June 28, 2020 Category: Genetics & Stem Cells Source Type: research

On the origin of vertebrate body plan: Insights from the endoderm using the hourglass model
Publication date: Available online 27 June 2020Source: Gene Expression PatternsAuthor(s): Chunpeng He, Tingyu Han, Xin Liao, Rui Guan, J.-Y. Chen, Kimberly D. Tremblay, Zuhong Lu (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - June 27, 2020 Category: Genetics & Stem Cells Source Type: research

Outside Front Cover
Publication date: June 2020Source: Gene Expression Patterns, Volume 36Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - June 11, 2020 Category: Genetics & Stem Cells Source Type: research

Editorial Board
Publication date: June 2020Source: Gene Expression Patterns, Volume 36Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - June 11, 2020 Category: Genetics & Stem Cells Source Type: research

Overexpression of a sour jujube gene ZjPYR1, encoding a putative abscisic acid receptor, increases sensitivity of the stomata and roots to ABA in Arabidopsis thaliana
Publication date: Available online 22 May 2020Source: Gene Expression PatternsAuthor(s): Lanting Qi, Yuguang Zheng, Peiyan Wang, Junna Song, Songsong Jing, Lijun Xu, Xuanyu Zhou, Zongqian Hao, Yuping Yan, Zhao Liu (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - May 24, 2020 Category: Genetics & Stem Cells Source Type: research

Expression of three P4-phospholipid flippases—atp11a, atp11b, and atp11c in zebrafish (Danio rerio)
Publication date: June 2020Source: Gene Expression Patterns, Volume 36Author(s): Alexia Hawkey-Noble, Jurgienne Umali, Gerissa Fowler, Curtis R. French (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - May 9, 2020 Category: Genetics & Stem Cells Source Type: research

Expression of three P4- phospholipid Flippases—atp11a, atp11b, and atp11c in zebrafish (Danio rerio)
Publication date: Available online 25 April 2020Source: Gene Expression PatternsAuthor(s): Alexia Hawkey-Noble, Jurgienne Umali, Gerissa Fowler, Curtis R. French (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - April 27, 2020 Category: Genetics & Stem Cells Source Type: research

Expression of zebrafish cpsf6 in embryogenesis and role of protein domains on subcellular localization
Publication date: Available online 21 April 2020Source: Gene Expression PatternsAuthor(s): Carla M. Borini Etichetti, Albano Tenaglia, María Nicol Arroyo, Javier E. Girardini (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - April 23, 2020 Category: Genetics & Stem Cells Source Type: research

Physiological and transcriptomic analysis of ‘Whangkeumbae’ pear core browning during low-temperature storage
Publication date: Available online 20 April 2020Source: Gene Expression PatternsAuthor(s): Hongsheng Zhou, Mengyao Tian, Wen Huang, Shufen Luo, Huali Hu, Yingtong Zhang, Leigang Zhang, Pengxia Li (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - April 21, 2020 Category: Genetics & Stem Cells Source Type: research

Molecular characterization and expression profiles of transcription factor Sox gene family in Culter alburnus
Publication date: Available online 4 April 2020Source: Gene Expression PatternsAuthor(s): Jianbo Zheng, Yongyi Jia, Shili Liu, Meili Chi, Shun Cheng, Zhimi Gu (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - April 5, 2020 Category: Genetics & Stem Cells Source Type: research

Outside Front Cover
Publication date: January 2020Source: Gene Expression Patterns, Volume 35Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 30, 2020 Category: Genetics & Stem Cells Source Type: research

The spatiotemporal expression pattern of Syndecans in murine embryonic teeth
Publication date: Available online 24 March 2020Source: Gene Expression PatternsAuthor(s): Jingyi Wu, Hong Li, Lu Han, Tianyu Sun, Ye Tian, Xiaofang Wang (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 24, 2020 Category: Genetics & Stem Cells Source Type: research

Expression pattern of the small muscle protein, X-linked (smpx) gene during zebrafish embryonic and larval developmental stages
Publication date: Available online 19 March 2020Source: Gene Expression PatternsAuthor(s): Anna Ghilardi, Alberto Diana, Laura Prosperi, Luca Del Giacco (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 20, 2020 Category: Genetics & Stem Cells Source Type: research

Distribution of transcripts of the GFOD gene family members gfod1 and gfod2 in the zebrafish central nervous system
Publication date: Available online 18 March 2020Source: Gene Expression PatternsAuthor(s): Carina G. Lechermeier, Andrea D'Orazio, Marcel Romanos, Christina Lillesaar, Carsten Drepper (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 18, 2020 Category: Genetics & Stem Cells Source Type: research

Outside Front Cover - Journal name, Cover image, Volume issue details, ISSN, Cover Date, Elsevier Logo and Society Logo if required
Publication date: January 2020Source: Gene Expression Patterns, Volume 35Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 17, 2020 Category: Genetics & Stem Cells Source Type: research

Editorial Board
Publication date: January 2020Source: Gene Expression Patterns, Volume 35Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - March 17, 2020 Category: Genetics & Stem Cells Source Type: research

Developmental expression of doublesex-related transcripts in the common house spider, Parasteatoda tepidariorum
Publication date: Available online 24 February 2020Source: Gene Expression PatternsAuthor(s): Mindy Gruzin, Marina Mekheal, Kelsey Ruhlman, Madison Winkowski, Jessica Petko (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - February 26, 2020 Category: Genetics & Stem Cells Source Type: research

Analysis of zebrafish Cryptochrome 2 and 4 expression in UV cone photoreceptors
This study provides a more detailed annotation of cry2 and cry4 expression within the zebrafish retina and highlights the feasibility of a well-established ablation paradigm to test if photoreceptors are required for magnetoreception in fish. Although evidence of magnetoreception in adult zebrafish has gained considerable evidence over the last decade (Shcherbakov et al., 2005; Takebe et al., 2012; Krylov et al., 2016; Myklatun et al., 2018) the mediating mechanism(s) remain unknown. Additionally, despite limited evidence that larval zebrafish are magnetoreceptive, many other larval fish have a characterized magnetic sense...
Source: Gene Expression Patterns - February 21, 2020 Category: Genetics & Stem Cells Source Type: research

Expression pattern of Nav2 in the murine CNS with development
Publication date: Available online 18 February 2020Source: Gene Expression PatternsAuthor(s): Caitlin Pook, Jamie M. Ahrens, Margaret Clagett-DameAbstractNeuron navigator 2 (NAV2, RAINB1, POMFIL2, HELAD1, unc53H2) is essential for nervous system development. In the present study the spatial distribution of Nav2 transcript in mouse CNS during embryonic, postnatal and adult life is examined. Because multiple NAV2 proteins are predicted based on alternate promoter usage and RNA splicing, in situ hybridization was performed using probes designed to the 5′ and 3′ ends of the Nav2 transcript, and PCR products using p...
Source: Gene Expression Patterns - February 20, 2020 Category: Genetics & Stem Cells Source Type: research

Expression of NFIA and NFIB within the murine spinal cord
Publication date: Available online 15 February 2020Source: Gene Expression PatternsAuthor(s): Elise Matuzelski, Tracey J. Harvey, Danyon Harkins, Thuan Nguyen, Marc J. Ruitenberg, Michael PiperAbstractThe Nuclear factor I proteins comprise a family of transcription factors that are expressed in many developing and mature cell populations, including within the central nervous system. Within the embryonic mouse spinal cord, NFIA and NFIB are expressed by neural progenitor cells lining the central canal, where they act to promote astrocytic and oligodendrocytic lineage specification. Cells lining the mature spinal cord centra...
Source: Gene Expression Patterns - February 15, 2020 Category: Genetics & Stem Cells Source Type: research

Detailed process analysis for glomerular capillary formation by immunofluorescence on ultra-thick sections
Publication date: Available online 3 February 2020Source: Gene Expression PatternsAuthor(s): Ting Yu, Fang Zhang, Yan Wu, Jianli Chen, Lu Dai, Furong Li, Xiaoliang Liu, Chi Liu, Jinghong ZhaoAbstractGlomerular capillary formation is one of the fundamental mysteries in renal developmental biology. However, there are still debates on this issue, and its detailed formation process has not been clarified. To resolve this problem, we performed antibody staining with ultra-thick section on embryonic and postnatal mouse kidneys. We obtained the expression patterns of several genes that play an important role in the development of...
Source: Gene Expression Patterns - February 5, 2020 Category: Genetics & Stem Cells Source Type: research

Expression patterns of pcbp gene family members during zebrafish embryogenesis
Publication date: Available online 31 January 2020Source: Gene Expression PatternsAuthor(s): Jie Wang, Xiaoling Guo, Dongxian Wang, Shulan YangAbstractThe poly(C)-binding protein (PCBP) family members belong to a subtype of RNA-binding proteins that are ubiquitously expressed with diverse functions. In mammals, PCBP family, also known as hnRNP E family, is composed of four proteins, namely PCBP1, PCBP2, PCBP3 and PCBP4. So far, no study has been documented on the physiological roles of each member in vertebrate development. Here we analysed the spatiotemporal expression patterns of zebrafish (Danio rerio) pcbp2 (identical ...
Source: Gene Expression Patterns - January 31, 2020 Category: Genetics & Stem Cells Source Type: research

Identification and characterization of germ cell genes vasa and dazl in a protogynous hermaphrodite fish, orange-spotted grouper (Epinephelus coioides)
Publication date: Available online 30 January 2020Source: Gene Expression PatternsAuthor(s): Ling Qu, Xi Wu, Meifeng Liu, Chaoyue Zhong, Hongyan Xu, Shuisheng Li, Haoran Lin, Xiaochun LiuAbstractVasa and dazl genes have been reported to play pivotal roles in germ cell development and differentiation both in vertebrates and invertebrates; however, little is known about their functions in germ cell differentiation during gametogenesis and sex reversal in hermaphroditic fish. In the present study, vasa (Ecvasa) and dazl (Ecdazl) cDNA were cloned from orange-spotted grouper (Epinephelus coioides). The full-length cDNA sequence...
Source: Gene Expression Patterns - January 30, 2020 Category: Genetics & Stem Cells Source Type: research

Expression of MYOSIN VIIA in developing mouse cochleovestibular ganglion neurons
Publication date: Available online 7 January 2020Source: Gene Expression PatternsAuthor(s): Sarah Law, Molly Stout, Amanda Rensch, Jennifer M. RowsellAbstractMyosins make up a large super family of motor proteins responsible for actin-based motility in most eukaryotic cells. Myosin VIIA is essential for the development and function of sensory hair cells in the inner ear. The role of Myosin VIIA in the development of cochleovestibular ganglion (CVG) neurons in the mouse is largely unknown. Neurons of the CVG innervate sensory hair cells of the cochlea and vestibular organs to transmit hearing and balance information respect...
Source: Gene Expression Patterns - January 8, 2020 Category: Genetics & Stem Cells Source Type: research

A new member of the forkhead box protein family in zebrafish: Domain composition, phylogenetic implication and embryonic expression pattern
In this study, we reported a novel member of Forkhead box (Fox) proteins found in model zebrafish (Danio rerio). This new gene we cloned was primarily assigned as zgc:162612, which locates on Chromosome 3 at 26,108,033–26,109,322 in the zebrafish genome, but encodes an uncharacterized protein, LOC100037333. After we determined the nucleotide and deduced amino acid sequences of zgc:162612, we found that zgc:162612 is an intronless gene and contains 1290 base pairs encoding 308 amino acid residues. Zgc:162612 protein is composed of a highly conserved DNA-binding domain similar to that of the Fox protein family, but w...
Source: Gene Expression Patterns - January 8, 2020 Category: Genetics & Stem Cells Source Type: research

Dynamic Delta-like1 expression in presomitic mesoderm cells during somite segmentation
Publication date: Available online 31 December 2019Source: Gene Expression PatternsAuthor(s): Akari Takagi, Akihiro Isomura, Kumiko Yoshioka-Kobayashi, Ryoichiro KageyamaAbstractDuring somite segmentation, the expression of clock genes such as Hes7 oscillates synchronously in the presomitic mesoderm (PSM). This synchronous oscillation slows down in the anterior PSM, leading to wave-like propagating patterns from the posterior to anterior PSM. Such dynamic expression depends on Notch signaling and is critical for somite formation. However, it remains to be determined how slowing oscillations in the anterior PSM are controll...
Source: Gene Expression Patterns - January 1, 2020 Category: Genetics & Stem Cells Source Type: research

Differential gene and protein expression in gastrocnemius and tibialis anterior muscle following tibial and peroneal nerve injury in rats
Publication date: Available online 4 December 2019Source: Gene Expression PatternsAuthor(s): Yaofa Lin, Zheng Xie, Jun Zhou, Gang Yin, Haodong LinAbstractPeripheral nerve injury is encountered quite commonly in the clinic, and treatment results are often not satisfactory. Therefore, promoting nerve regeneration and functional recovery is a primary goal of neuroscience research. Recovery of corresponding target muscle can differ following peripheral nerve injury, but the reasons are unknown. Herein, we investigated differential gene and protein expression in gastrocnemius and tibialis anterior muscle following tibial and co...
Source: Gene Expression Patterns - December 5, 2019 Category: Genetics & Stem Cells Source Type: research

Differential expression of foxo genes during embryonic development and in adult tissues of Xenopus tropicalis
Publication date: Available online 23 November 2019Source: Gene Expression PatternsAuthor(s): Li Zheng, Cheng-Zhou Mao, Yun-Qian Bi, Yi-Min Zhou, Zhou Zhang, Hui Zhao, Kyu-Sang Park, Ruijin Huang, Dong-Qing Cai, Xu-Feng QiAbstractThe forkhead-box transcription factors of O subfamily (FOXO) play important roles in regulation of various biological functions. We cloned foxo1, foxo3, foxo4, and foxo6 from Xenopus tropicalis (hereafter X. tropicalis), and examined their expression in embryos and adult tissues. Maternal transcripts of foxo1 and foxo3 genes are detected within the animal half of the early embryo, their zygotic tr...
Source: Gene Expression Patterns - November 24, 2019 Category: Genetics & Stem Cells Source Type: research

Editorial Board
Publication date: December 2019Source: Gene Expression Patterns, Volume 34Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - November 22, 2019 Category: Genetics & Stem Cells Source Type: research

Expression patterns of three JAK–STAT pathway genes in feather follicle development during chicken embryogenesis
Publication date: Available online 20 November 2019Source: Gene Expression PatternsAuthor(s): Yingfeng Tao, Xiaoliu Zhou, Zhiwei Liu, Xiaokang Zhang, Yangfan Nie, Xinting Zheng, Shaomei Li, Xuewen Hu, Ge Yang, Qianqian Zhao, Chunyan MouAbstractThe Janus kinase (JAK)–signal transducer and activator of transcription (STAT) (JAK–STAT) pathway is shown to restrain the hair follicles in catagen and telogen and prevent anagen reentry in murine hair follicle cycling. The early roles of JAK-STAT pathway genes in skin development remain uncharacterized in mouse and chicken models. Here, we revealed the expression patter...
Source: Gene Expression Patterns - November 22, 2019 Category: Genetics & Stem Cells Source Type: research

Sox9 in mouse urogenital sinus epithelium mediates elongation of prostatic buds and expression of genes involved in epithelial cell migration
Publication date: Available online 25 October 2019Source: Gene Expression PatternsAuthor(s): Andrew J. Schneider, Joseph Gawdzik, Chad M. Vezina, Tracie R. Baker, Richard E. PetersonAbstractPrevious studies identified Sox9 as a critical mediator of prostate development but the precise stage when Sox9 acts had not been determined. A genetic approach was used to delete Sox9 from mouse urogenital sinus epithelium (UGE) prior to prostate specification. All prostatic bud types (anterior, dorsolateral and ventral) were stunted in Sox9 conditional knockouts (cKOs) even though the number of prostatic buds did not differ from that ...
Source: Gene Expression Patterns - October 26, 2019 Category: Genetics & Stem Cells Source Type: research

Expression of nucleosome assembly protein 1 like genes in zebrafish embryos
In this study, we finished the complete expression patterns of nap1l1 and nap1l4a in zebrafish embryos by whole-mount in situ hybridization. We observed maternal existence of nap1l1 transcript and that its zygotic expression is abundant and not spatially restricted at 6 somite stage, while nap1l4a mRNA is not detectable until 6 somite stage when it is weakly transcribed throughout the embryo. At 24 h post-fertilization (hpf), nap1l1 is predominantly expressed in the central nervous system, neural tube, ventral mesoderm, branchial arches, and pectoral fins, while nap1l4a mRNA is throughout the embryo, enriched in the eyes...
Source: Gene Expression Patterns - October 25, 2019 Category: Genetics & Stem Cells Source Type: research

Armadillo-like helical domain containing-4 is dynamically expressed in both the first and second heart fields
Publication date: Available online 24 October 2019Source: Gene Expression PatternsAuthor(s): Simon J. Conway, Reagan McConnell, Olga Simmons, Paige L. SniderAbstractArmadillo repeat and Armadillo-like helical domain containing proteins form a large family with diverse and fundamental functions in many eukaryotes. Herein we investigated the spatiotemporal expression pattern of Armadillo-like helical domain containing 4 (or Armh4) as an uncharacterized protein coding mouse gene, within the mouse embryo during the initial stages of heart morphogenesis. We found Armh4 is initially expressed in both first heart field as well as...
Source: Gene Expression Patterns - October 25, 2019 Category: Genetics & Stem Cells Source Type: research

The expression of FoxG1 in the early development of the European river lamprey Lampetra fluviatilis demonstrates significant heterochrony with that in other vertebrates
Publication date: December 2019Source: Gene Expression Patterns, Volume 34Author(s): Galina V. Ermakova, Alexandr V. Kucheryavyy, Andrey G. Zaraisky, Andrey V. BayramovAbstractFoxG1, a member of the Fox/Forkhead family of winged helix transcription factors, plays key roles in the induction and spatial compartmentalization of the telencephalon in vertebrates. Loss- and gain-of-function experiments have established FoxG1 as a maintenance factor for neural progenitors and a crucial player in the specification of the ventral telencephalon (subpallium). For the first time in evolution, the telencephalon appeared in the ancestor...
Source: Gene Expression Patterns - October 5, 2019 Category: Genetics & Stem Cells Source Type: research

The expression of FoxG in the early development of the European river lamprey Lampetra fluviatilis demonstrates significant heterochrony with that in other vertebrates
Publication date: Available online 28 September 2019Source: Gene Expression PatternsAuthor(s): Galina V. Ermakova, Alexandr V. Kucheryavyy, Andrey G. Zaraisky, Andrey V. BayramovAbstractFoxG1, a member of the Fox/Forkhead family of winged helix transcription factors, plays key roles in the induction and spatial compartmentalization of the telencephalon in vertebrates. Loss- and gain-of-function experiments have established FoxG1 as a maintenance factor for neural progenitors and a crucial player in the specification of the ventral telencephalon (subpallium). For the first time in evolution, the telencephalon appeared in th...
Source: Gene Expression Patterns - September 29, 2019 Category: Genetics & Stem Cells Source Type: research

Novel cis-regulatory regions in ecdysone responsive genes are sufficient to promote gene expression in Drosophila ovarian cells
Publication date: Available online 26 September 2019Source: Gene Expression PatternsAuthor(s): Samantha I. McDonald, Allison N. Beachum, Taylor D. Hinnant, Amelia J. Blake, Tierra Bynum, E. Parris Hickman, Joseph Barnes, Kaely L. Churchill, Tamesia S. Roberts, Denise E. Zangwill, Elizabeth T. AblesAbstractThe insect steroid hormone ecdysone is a key regulator of oogenesis in Drosophila melanogaster and many other species. Despite the diversity of cellular functions of ecdysone in oogenesis, the molecular regulation of most ecdysone-responsive genes in ovarian cells remains largely unexplored. We performed a functional scre...
Source: Gene Expression Patterns - September 27, 2019 Category: Genetics & Stem Cells Source Type: research

Selection and validation of castor bean (Ricinus communis) reference genes for quantitative PCR (RT-qPCR) in developing and germinating seeds and expression pattern of four ricin-family genes
This study aims to expand the set of internal control genes used for RT-qPCR experiments with Castor bean (Ricinus communis) seeds by evaluating candidate genes across several seed tissues and developmental stages. Nine reference genes were selected, including actin-11 (ACT11), tubulin alpha-2 (Tα2), elongation factor 1-alpha (EF1-α), protein phosphatase 2A-2 (PP2A2), polyubiquitin-3 (PUB3) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Biological samples consisted of R. communis seeds in 15 stages of maturation and germination. We demonstrate that PP2A2, PUB3 and EF1-α are the most stably expresse...
Source: Gene Expression Patterns - September 18, 2019 Category: Genetics & Stem Cells Source Type: research

Ontogeny and tissue-specific expression of immune-relevant genes in Catla catla (Hamilton)
Publication date: Available online 14 September 2019Source: Gene Expression PatternsAuthor(s): P. Arya, P.K. Pradhan, Anutosh Paria, R. Sharma, Dev K. Verma, Ravindra, G. Rathore, N. SoodAbstractIndia is the second largest fish producing country in the world with production of 12.6 million tonnes (mt) in 2017–18, and Indian major carps (IMCs) share bulk of this fish production. Catla, Catla catla is the fastest growing species among IMCs. However, the survival rate of catla during larval rearing is normally lower than the other IMCs i.e rohu Labeo rohita, and mrigal Cirrhinus mrigala. Continuous efforts are devoted f...
Source: Gene Expression Patterns - September 14, 2019 Category: Genetics & Stem Cells Source Type: research

Comparative gene expression analysis of the engulfment and cell motility (ELMO) protein family in the mouse brain
Publication date: Available online 12 September 2019Source: Gene Expression PatternsAuthor(s): Yumi Sato, Akira Sato, Shota Mizuno, Jun-na Hirota, Shuhei Fujima, Chiaki Ishii, Yoshitake Sano, Teiichi FuruichiAbstractEngulfment and cell motility (ELMO) proteins bind to Dock180, a guanine nucleotide exchange factor (GEF) of the Rac family, and regulate GEF activity. The resultant ELMO/Dock180/Rac module regulates cytoskeletal reorganization responsible for the engulfment of apoptotic cells, cell migration, and neurite extension. The expression and function of Elmo family proteins in the nervous system, however, are not yet f...
Source: Gene Expression Patterns - September 13, 2019 Category: Genetics & Stem Cells Source Type: research

Spatiotemporal expression profile of embryonic and adult ankyrin repeat and EF-hand domain containing protein 1-encoding genes ankef1a and ankef1b in zebrafish
Publication date: Available online 12 September 2019Source: Gene Expression PatternsAuthor(s): Jeffrey G. Daniel, Jennifer R. PanizziAbstractRecent human next-generation sequencing (NGS) studies indicate a correlation between ANKEF1 (ankyrin repeat and EF-hand domain containing protein 1) expression and cilia formation or function. Additionally, a single study conducted in the African clawed frog (Xenopus laevis) showed ankef1 is down-regulated after pharmacological fibroblast growth factor (FGF) inhibition and plays a role in protocadherin-mediated cell protrusion and adhesion. That study also revealed a critical role for...
Source: Gene Expression Patterns - September 12, 2019 Category: Genetics & Stem Cells Source Type: research

Editorial Board
Publication date: September 2019Source: Gene Expression Patterns, Volume 33Author(s): (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - August 25, 2019 Category: Genetics & Stem Cells Source Type: research

Expression of transcription factors and signaling molecules in the cerebellar granule cell development
This study provides a basis for future studies on the cerebellar GC development and medulloblastoma. (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - August 20, 2019 Category: Genetics & Stem Cells Source Type: research

Expression of Lhx6 in the adult and developing mouse retina
ConclusionLhx6 was expressed in RGCs and ACs in both the adult and developing mouse retina. (Source: Gene Expression Patterns)
Source: Gene Expression Patterns - July 31, 2019 Category: Genetics & Stem Cells Source Type: research