Structural characterization of NORAD reveals a stabilizing role of spacers and two new repeat units
Publication date: Available online 29 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Uciel Chorostecki, Ester Saus, Toni Gabaldón (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 30, 2021 Category: Biotechnology Source Type: research

Robustness of differential gene expression analysis of RNA-seq
Publication date: Available online 26 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): A. Stupnikov, CE. McInerney, K. Savage, SA. McIntosh, F. Emmert-Streib, R. Kennedy, M. Salto-Tellez, KM. Prise, DG. McArt (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 28, 2021 Category: Biotechnology Source Type: research

Screening of World Approved Drugs against Highly Dynamical Spike Glycoprotein of SARS-CoV-2 using CaverDock and Machine Learning
Publication date: Available online 26 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Gaspar P. Pinto, Ondrej Vavra, Sergio M. Marques, Jiri Filipovic, David Bednar, Jiri Damborsky (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 28, 2021 Category: Biotechnology Source Type: research

Mechanisms of Metal-Dependent Non-Redox Decarboxylases from Quantum Chemical Calculations
Publication date: Available online 26 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Xiang Sheng, Fahmi Himo (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 28, 2021 Category: Biotechnology Source Type: research

Statistical methods for mediation analysis in the era of high-throughput genomics: current successes and future challenges
Publication date: Available online 26 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Ping Zeng, Zhonghe Shao, Xiang Zhou (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 28, 2021 Category: Biotechnology Source Type: research

covNorm: An R Package for Coverage Based Normalization of Hi-C and Capture Hi-C Data
Publication date: Available online 27 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Kyukwang Kim, Inkyung Jung (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 28, 2021 Category: Biotechnology Source Type: research

Altered APE1 activity on abasic ribonucleotides is mediated by changes in the nucleoside sugar pucker
Publication date: Available online 25 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Nicole M. Hoitsma, Timothy H. Click, Pratul K. Agarwal, Bret D. Freudenthal (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 26, 2021 Category: Biotechnology Source Type: research

Physics of compartmentalization: how phase separation and signaling shape membrane and organelle identity
Publication date: Available online 24 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Elisa Floris, Andrea Piras, Luca Dall’Asta, Andrea Gamba, Emilio Hirsch, Carlo C. Campa (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 25, 2021 Category: Biotechnology Source Type: research

A comparative study of multiple instance learning methods for cancer detection using T-cell receptor sequences
Publication date: Available online 24 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Danyi Xiong, Ze Zhang, Tao Wang, Xinlei Wang (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 25, 2021 Category: Biotechnology Source Type: research

Representation learning applications in biological sequence analysis
Publication date: Available online 23 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Hitoshi Iuchi, Taro Matsutani, Keisuke Yamada, Natsuki Iwano, Shunsuke Sumi, Shion Hosoda, Shitao Zhao, Tsukasa Fukunaga, Michiaki Hamada (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 24, 2021 Category: Biotechnology Source Type: research

Prediction of repurposed drugs for Coronaviruses using artificial intelligence and machine learning
Publication date: Available online 24 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Akanksha Rajput, Anamika Thakur, Adhip Mukhopadhyay, Sakshi Kamboj, Amber Rastogi, Sakshi Gautam, Harvinder Jassal, Manoj Kumar (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 24, 2021 Category: Biotechnology Source Type: research

A computational workflow for the detection of candidate diagnostic biomarkers of Kawasaki disease using time-series gene expression data
Publication date: Available online 24 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Vasileios C. Pezoulas, Costas Papaloukas, Maëva Veyssiere, Andreas Goules, Athanasios G. Tzioufas, Vassili Soumelis, Dimitrios I. Fotiadis (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 24, 2021 Category: Biotechnology Source Type: research

Data processing workflow for large-scale immune monitoring studies by mass cytometry
Publication date: Available online 21 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Paulina Rybakowska, Sofie Van Gassen, Katrien Quintelier, Yvan Saeys, Marta E. Alarcón-Riquelme, Concepción Marañón (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 22, 2021 Category: Biotechnology Source Type: research

Recent advances in functional annotation and prediction of the epitranscriptome
Publication date: Available online 21 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Song-Yao Zhang, Shao-Wu Zhang, Teng Zhang, Xiao-Nan Fan, Jia Meng (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 22, 2021 Category: Biotechnology Source Type: research

Antibiotic resistance: time of synthesis in a post-genomic age
Publication date: Available online 21 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Teresa Gil-Gil, Luz Edith Ochoa-Sánchez, Fernando Baquero, José Luis Martínez (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 22, 2021 Category: Biotechnology Source Type: research