Hello WDL ( Workflow Description Language )
This is a quick note about my first WDL workflow (Workflow Description Language) https://software.broadinstitute.org/wdl/.
As a Makefile, my workflow would be the following one:
NAME?=world
$(NAME)_sed.txt : $(NAME).txt
sed 's/Hello/Goodbye/' $ $@
$(NAME).txt:
echo "Hello $(NAME)"> $@
Executed as:$ make NAME=WORLD
echo "Hello WORLD"> WORLD.txt
sed 's/Hello/Goodbye/' WORLD.txt>
Source: YOKOFAKUN - Category: Bioinformatics Authors: Pierre Lindenbaum Source Type: blogs
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