[ASAP] Application of a Novel Hybrid CNN-GNN for Peptide Ion Encoding
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00234 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 19, 2022 Category: Biochemistry Authors: Kevin McDonnell, Florence Abram, and Enda Howley Source Type: research

[ASAP] Spatial Venomics Cobra Venom System Reveals Spatial Differentiation of Snake Toxins by Mass Spectrometry Imaging
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00424 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 15, 2022 Category: Biochemistry Authors: Benjamin-Florian Hempel, Maik Damm, Daniel Petras, Taline D. Kazandjian, Claudia A. Szentiks, Guido Fritsch, Grit Nebrich, Nicholas R. Casewell, Oliver Klein, and Roderich D. Su ̈ssmuth Source Type: research

[ASAP] MS-TAFI: A Tool for the Analysis of Fragment Ions Generated from Intact Proteins
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00594 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 14, 2022 Category: Biochemistry Authors: Kyle J. Juetten and Jennifer S. Brodbelt Source Type: research

[ASAP] A Dual Detergent Strategy to Capture a Bacterial Outer Membrane Proteome in Peptidiscs for Characterization by Mass Spectrometry and Binding Assays
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00560 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 14, 2022 Category: Biochemistry Authors: John William Young, Zhiyu Zhao, Irvinder Singh Wason, and Franck Duong van Hoa Source Type: research

[ASAP] Proteome Decomplexation of < named-content content-type="genus-species" xlink:type="simple" > Trimeresurus erythrurus < /named-content > Venom from Mizoram, India
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00642 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 14, 2022 Category: Biochemistry Authors: Susmita Thakur, Avni Blotra, Karthikeyan Vasudevan, Anita Malhotra, Hmar Tlawmte Lalremsanga, Vishal Santra, and Robin Doley Source Type: research

[ASAP] Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00651 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 13, 2022 Category: Biochemistry Authors: Nadezhda T. Doncheva, John H. Morris, Henrietta Holze, Rebecca Kirsch, Katerina C. Nastou, Yesid Cuesta-Astroz, Thomas Rattei, Damian Szklarczyk, Christian von Mering, and Lars J. Jensen Source Type: research

[ASAP] Disruptive Effects of Resveratrol on a Bacterial Pathogen of Beans
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00633 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 13, 2022 Category: Biochemistry Authors: Bret Cooper Source Type: research

[ASAP] Sequence Coverage Visualizer: A Web Application for Protein Sequence Coverage 3D Visualization
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00358 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 13, 2022 Category: Biochemistry Authors: Xinhao Shao, Christopher Grams, and Yu Gao Source Type: research

[ASAP] ZSWIM1 Promotes the Proliferation and Metastasis of Lung Adenocarcinoma Cells through the STK38/MEKK2/ERK1/2 Axis
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00412 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 13, 2022 Category: Biochemistry Authors: Xuejuan Gao, Qionghua Lian, Baiye Guan, Qiu-Yu Liu, Meng Meng, Yang Chen, Jingjie Jin, Huihua Li, Xiaohui Liu, Zhenghua Sun, Langxia Liu, Qing-Yu He, and Gong Zhang Source Type: research

[ASAP] CPPA: A Web Tool for Exploring Proteomic and Phosphoproteomic Data in Cancer
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00512 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Guo-sheng Hu, Zao-zao Zheng, Yao-hui He, Du-chuang Wang, and Wen Liu Source Type: research

[ASAP] MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00554 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Kai Cheng, Zhibin Ning, Leyuan Li, Xu Zhang, Joeselle M. Serrana, Janice Mayne, and Daniel Figeys Source Type: research

[ASAP] Proteomics Analysis of Plasma-Derived Exosomes Unveils the Aberrant Complement and Coagulation Cascades in Dermatomyositis/Polymyositis
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00532 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Shuhui Meng, Tingting Wang, Qianqian Zhao, Qiu Hu, Yulan Chen, Heng Li, Cuilian Liu, Dongzhou Liu, and Xiaoping Hong Source Type: research

[ASAP] Intra-Individual Variation in Disease-Specific IgG Fc Glycoform Ratios to Monitor the Disease Progression of Lung Cancer
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00680 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Jinyu Zhou, Yuying Du, Zhizhen Lai, Tianjing Chen, and Zhili Li Source Type: research

[ASAP] Impact of Internal Fragments on Top-Down Analysis of Intact Proteins by 193 nm UVPD
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00583 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Sean D. Dunham, Benqian Wei, Carter Lantz, Joseph A. Loo, and Jennifer S. Brodbelt Source Type: research

[ASAP] psm_utils: A High-Level Python API for Parsing and Handling Peptide-Spectrum Matches and Proteomics Search Results
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.2c00609 (Source: Journal of Proteome Research)
Source: Journal of Proteome Research - December 12, 2022 Category: Biochemistry Authors: Ralf Gabriels, Arthur Declercq, Robbin Bouwmeester, Sven Degroeve, and Lennart Martens Source Type: research