< em > Kaistella rhinocerotis < /em > sp. nov., isolated from the faeces of rhinoceros and reclassification of < em > Chryseobacterium faecale < /em > as < em > Kaistella faecalis < /em > comb. nov
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006338.ABSTRACTStrain Ran72T, a novel Gram-stain-negative, obligately aerobic, non-motile, and rod-shaped bacterium, was isolated from the faeces of the rhinoceros species Ceratotherium simum. The novel bacterial strain grew optimally in Reasoner's 2A medium under the following conditions: 0 % (w/v) NaCl, pH 7.5, and 30 °C. Based on phylogenetic analysis using 16S rRNA gene sequencing, strain Ran72T was found to be most closely related to Chryseobacterium faecale F4T (98.4 %), Kaistella soli DKR-2T (98.0 %), and Kaistella haifensis H38T (97.4 %). A comprehens...
Source: International Journal of Systematic and Evolutionary Microbiology - April 11, 2024 Category: Microbiology Authors: Yerim Park Jihyeon Min Wonjae Kim Woojun Park Source Type: research

< em > Chryseobacterium metallicongregator, < /em > sp. nov., a bacterium possessing metallophore activity towards rare earth elements
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006337.ABSTRACTA polyphasic taxonomic study was carried out on strain ES2T, isolated from sediment of a wetland created to remediate acid drainage from a coal mine. The rod-shaped bacterium formed yellow/orange pigmented colonies and produced the pigment flexirubin. The 16S rRNA gene sequence results assigned the strain to Chryseobacterium, with 98.9 and 98.3 % similarity to Chryseobacterium vietnamense and Chryseobacterium cucumeris, respectively. Computation of the average nucleotide identity and digital DNA-DNA hybridization values with the closest phylogen...
Source: International Journal of Systematic and Evolutionary Microbiology - April 11, 2024 Category: Microbiology Authors: Emily Spotts Nathan Guy George Lengyel Jonathan Franks Chris Maltman Source Type: research

< em > Micromonospora cathayae < /em > sp. nov., isolated from the rhizosphere soil of < em > Cathaya argyrophylla < /em >
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006332.ABSTRACTA novel actinobacterium, strain HUAS 3T, was isolated from the rhizosphere soil of Cathaya argyrophylla collected in Hunan Province, PR China. Strain HUAS 3T contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The dominant menaquinones were MK-9(H4), MK-9(H6), MK-10(H2) and MK-9(H4). The polar lipids consisted of diphosphatidylglycerol, phospholipids, phosphatidylethanolamine, phosphatidylglycerol, phosphotidylinositol and phosphatidylinositol mannosides. The main cellular fatty acids (>5.0 %) were C17 : 1 ω8c, iso-C16 : 0, C1...
Source: International Journal of Systematic and Evolutionary Microbiology - April 11, 2024 Category: Microbiology Authors: Pei-Lan Long Li Fu Yan Xiao Jian Gao Source Type: research

Identification and biological characteristics of < em > Enterococcus casseliflavus < /em > TN-47 isolated from < em > Monochamus alternatus < /em >
This study aimed to investigate the in vitro antimicrobial and biological characteristics of Enterococcus casseliflavus TN-47 (PP411196), isolated from the gastrointestinal tract of M. alternatus in Jilin Province, PR China. Among 13 isolates obtained from the insects, five were preliminarily screened for antimicrobial activity. E. casseliflavus TN-47, which exhibited the strongest antimicrobial activity, was identified. E. casseliflavus TN-47 possessed antimicrobial activity against Staphylococcus aureus USA300 and Salmonella enterica serovar Pullorum ATCC 19945. Furthermore, E. casseliflavus TN-47 was sensitive to tetrac...
Source: International Journal of Systematic and Evolutionary Microbiology - April 11, 2024 Category: Microbiology Authors: Zi-Ran Peng Jian-Gang Zhang Jia-Bao Zhang Xiao-Qi Lin Wei Chen Yong-Jun Yang Zhen-Zhen Liu Source Type: research

< em > Kaistella rhinocerotis < /em > sp. nov., isolated from the faeces of rhinoceros and reclassification of < em > Chryseobacterium faecale < /em > as < em > Kaistella faecalis < /em > comb. nov
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006338.ABSTRACTStrain Ran72T, a novel Gram-stain-negative, obligately aerobic, non-motile, and rod-shaped bacterium, was isolated from the faeces of the rhinoceros species Ceratotherium simum. The novel bacterial strain grew optimally in Reasoner's 2A medium under the following conditions: 0 % (w/v) NaCl, pH 7.5, and 30 °C. Based on phylogenetic analysis using 16S rRNA gene sequencing, strain Ran72T was found to be most closely related to Chryseobacterium faecale F4T (98.4 %), Kaistella soli DKR-2T (98.0 %), and Kaistella haifensis H38T (97.4 %). A comprehens...
Source: International Journal of Systematic and Evolutionary Microbiology - April 11, 2024 Category: Microbiology Authors: Yerim Park Jihyeon Min Wonjae Kim Woojun Park Source Type: research

< em > Wickerhamomyces corioli < /em > f.a., sp. nov. < em > , < /em > a novel yeast species discovered in two mushroom species
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006333.ABSTRACTTwo yeast strains, designated as 19-39-3 and 19-40-2, obtained from the fruiting bodies of Trametes versicolor and Marasmius siccus collected in Yunwu Mountain Forest Park, PR China, have been identified as representing a novel asexual ascomycetous yeast species. From the results of phylogenetic analyses of the sequences of the D1/D2 domains of the large subunit (LSU) rRNA, small subunit (SSU) rRNA and translation elongation factor 1-α (TEF1) genes, it was determined that these strains represent a member of the genus Wickerhamomyces, with Wicke...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Min Liu Ruo-Xin Ding Yu-Xuan Zhang Hao-Ze Li Qi-Ming Wang Source Type: research

< em > Savitreea siamensis < /em > sp. nov., an ascomycetous yeast species in the family < em > Saccharomycetaceae < /em > discovered in Thailand
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006330.ABSTRACTFour yeast strains, representing a novel anamorphic species, were isolated in Thailand. The two strains (ST-3660T and ST-3647) were obtained from two different estuarine water samples in a mangrove forest. Strain DMKU-FW1-37 was derived from a grease sample, and another strain (TSU57) was isolated from a fruiting body of Phallus sp. Pairwise sequence analysis showed that the four strains had identical or differed by only one nucleotide substitution in the D1/D2 domains of the large subunit (LSU) rRNA gene, and differed by one to three nucleotide...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Pannida Khunnamwong Sasitorn Jindamorakot Somjit Am-In Varunya Sakpuntoon Nantana Srisuk Pumin Nutaratat Wanatchaporn Boontham Savitree Limtong Source Type: research

< em > Marinobacter qingdaonensis < /em > sp. nov., a moderately halotolerant bacterium isolated from intertidal sediment
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006327.ABSTRACTA Gram-stain-negative, aerobic, rod-shaped and halotolerant bacterium, designated as strain ASW11-75T, was isolated from intertidal sediments in Qingdao, PR China, and identified using a polyphasic taxonomic approach. Growth of strain ASW11-75T occurred at 10-45 °C (optimum, 37 °C), pH 6.5-9.0 (optimum, pH 8.0) and 0.5-18.0 % NaCl concentrations (optimum, 2.5 %). Phylogenetic analyses based on 16S rRNA gene sequences and 1179 single-copy orthologous clusters indicated that strain ASW11-75T is affiliated with the genus Marinobacter. Strain ASW1...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Xuan Shao Ya-Nan Wang Ya-Fei Zhang Di Meng Jing-Yun Su Bing Yu Mei-Ling Sun Yi Li Source Type: research

< em > Wickerhamomyces corioli < /em > f.a., sp. nov. < em > , < /em > a novel yeast species discovered in two mushroom species
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006333.ABSTRACTTwo yeast strains, designated as 19-39-3 and 19-40-2, obtained from the fruiting bodies of Trametes versicolor and Marasmius siccus collected in Yunwu Mountain Forest Park, PR China, have been identified as representing a novel asexual ascomycetous yeast species. From the results of phylogenetic analyses of the sequences of the D1/D2 domains of the large subunit (LSU) rRNA, small subunit (SSU) rRNA and translation elongation factor 1-α (TEF1) genes, it was determined that these strains represent a member of the genus Wickerhamomyces, with Wicke...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Min Liu Ruo-Xin Ding Yu-Xuan Zhang Hao-Ze Li Qi-Ming Wang Source Type: research

< em > Savitreea siamensis < /em > sp. nov., an ascomycetous yeast species in the family < em > Saccharomycetaceae < /em > discovered in Thailand
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006330.ABSTRACTFour yeast strains, representing a novel anamorphic species, were isolated in Thailand. The two strains (ST-3660T and ST-3647) were obtained from two different estuarine water samples in a mangrove forest. Strain DMKU-FW1-37 was derived from a grease sample, and another strain (TSU57) was isolated from a fruiting body of Phallus sp. Pairwise sequence analysis showed that the four strains had identical or differed by only one nucleotide substitution in the D1/D2 domains of the large subunit (LSU) rRNA gene, and differed by one to three nucleotide...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Pannida Khunnamwong Sasitorn Jindamorakot Somjit Am-In Varunya Sakpuntoon Nantana Srisuk Pumin Nutaratat Wanatchaporn Boontham Savitree Limtong Source Type: research

< em > Marinobacter qingdaonensis < /em > sp. nov., a moderately halotolerant bacterium isolated from intertidal sediment
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006327.ABSTRACTA Gram-stain-negative, aerobic, rod-shaped and halotolerant bacterium, designated as strain ASW11-75T, was isolated from intertidal sediments in Qingdao, PR China, and identified using a polyphasic taxonomic approach. Growth of strain ASW11-75T occurred at 10-45 °C (optimum, 37 °C), pH 6.5-9.0 (optimum, pH 8.0) and 0.5-18.0 % NaCl concentrations (optimum, 2.5 %). Phylogenetic analyses based on 16S rRNA gene sequences and 1179 single-copy orthologous clusters indicated that strain ASW11-75T is affiliated with the genus Marinobacter. Strain ASW1...
Source: International Journal of Systematic and Evolutionary Microbiology - April 9, 2024 Category: Microbiology Authors: Xuan Shao Ya-Nan Wang Ya-Fei Zhang Di Meng Jing-Yun Su Bing Yu Mei-Ling Sun Yi Li Source Type: research

< em > Pseudomonas kulmbachensis < /em > sp. nov. and < em > Pseudomonas paraveronii < /em > sp. nov., originating from chilled beef and chicken breast
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006293.ABSTRACTBy investigating wet and dry age-related ripening of beef, Pseudomonas strains V3/3/4/13T and V3/K/3/5T were isolated. Strain V3/3/4/13T exhibited more than 99 % 16S rRNA gene-based similarity to Pseudomonas fragi and other members of this group, while isolate V3/K/3/5T was very close to Pseudomonas veronii and a number of relatives within the Pseudomonas fluorescens group. Additional comparisons of complete rpoB sequences and draft genomes allowed us to place isolate V3/3/4/13T close to Pseudomonas deceptionensis DSM 26521T. In the case of V3/K...
Source: International Journal of Systematic and Evolutionary Microbiology - April 8, 2024 Category: Microbiology Authors: Sonja Lick Daniel Wibberg Tobias Busche Jochen Blom Christina Grimmler Alexander Goesmann J örn Kalinowski Source Type: research

< em > Pseudomonas kulmbachensis < /em > sp. nov. and < em > Pseudomonas paraveronii < /em > sp. nov., originating from chilled beef and chicken breast
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006293.ABSTRACTBy investigating wet and dry age-related ripening of beef, Pseudomonas strains V3/3/4/13T and V3/K/3/5T were isolated. Strain V3/3/4/13T exhibited more than 99 % 16S rRNA gene-based similarity to Pseudomonas fragi and other members of this group, while isolate V3/K/3/5T was very close to Pseudomonas veronii and a number of relatives within the Pseudomonas fluorescens group. Additional comparisons of complete rpoB sequences and draft genomes allowed us to place isolate V3/3/4/13T close to Pseudomonas deceptionensis DSM 26521T. In the case of V3/K...
Source: International Journal of Systematic and Evolutionary Microbiology - April 8, 2024 Category: Microbiology Authors: Sonja Lick Daniel Wibberg Tobias Busche Jochen Blom Christina Grimmler Alexander Goesmann J örn Kalinowski Source Type: research

Proposal of < em > Sphingobacterium allocomposti < /em > nom. nov., < em > Mycobacterium chelonae < /em > subsp. < em > bovistauri < /em > nom. nov. and < em > Lactobacillus delbrueckii < /em > subsp. < em > allosunkii < /em > nom. nov. as new names with replacement specific or subspecific epithets, respectively, for three illegitimate prokaryotic names < em > Sphingobacterium composti < /em > Yoo < em > et al < /em > . 2007, < em > Mycobacterium chelonae < /em > subsp. < em > bovis < /em > Kim < em > et al < /em > . 2017 and < em > Lactobacillus delbrueckii < /em > subsp. < em > sunkii < /em > Kudo < em > et al < /em > . 2012; proposal of < em > Christiangramia oceanisediminis < /em > comb. nov. and < em > Christiangramia crocea < /em > comb. nov. as replacement names respectively for two illegitimate prokaryotic names < em > Gramella oceanisediminis < /em > Yang < em > et al < /em > . 2023 and < em > Gramella crocea < /em > Zhang < em > et al < /em > . 2023
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006319.ABSTRACTAs required by Rule 54 of the International Code of Nomenclature of Prokaryotes, the authors propose the replacement specific epithet 'allocomposti' for the illegitimate prokaryotic name Sphingobacterium composti Yoo et al. 2007, the replacement subspecific epithet 'bovistauri' for Mycobacterium chelonae subsp. bovis Kim et al. 2017 and the replacement subspecific epithet 'allosunkii' for Lactobacillus delbrueckii subsp. sunkii Kudo et al. 2012. Meanwhile, new combinations Christiangramia oceanisediminis and Christiangramia crocea are also propo...
Source: International Journal of Systematic and Evolutionary Microbiology - April 5, 2024 Category: Microbiology Authors: Ruo-Yun Goo Meng-Syun Li Source Type: research

Proposal of < em > Sphingobacterium allocomposti < /em > nom. nov., < em > Mycobacterium chelonae < /em > subsp. < em > bovistauri < /em > nom. nov. and < em > Lactobacillus delbrueckii < /em > subsp. < em > allosunkii < /em > nom. nov. as new names with replacement specific or subspecific epithets, respectively, for three illegitimate prokaryotic names < em > Sphingobacterium composti < /em > Yoo < em > et al < /em > . 2007, < em > Mycobacterium chelonae < /em > subsp. < em > bovis < /em > Kim < em > et al < /em > . 2017 and < em > Lactobacillus delbrueckii < /em > subsp. < em > sunkii < /em > Kudo < em > et al < /em > . 2012; proposal of < em > Christiangramia oceanisediminis < /em > comb. nov. and < em > Christiangramia crocea < /em > comb. nov. as replacement names respectively for two illegitimate prokaryotic names < em > Gramella oceanisediminis < /em > Yang < em > et al < /em > . 2023 and < em > Gramella crocea < /em > Zhang < em > et al < /em > . 2023
Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006319.ABSTRACTAs required by Rule 54 of the International Code of Nomenclature of Prokaryotes, the authors propose the replacement specific epithet 'allocomposti' for the illegitimate prokaryotic name Sphingobacterium composti Yoo et al. 2007, the replacement subspecific epithet 'bovistauri' for Mycobacterium chelonae subsp. bovis Kim et al. 2017 and the replacement subspecific epithet 'allosunkii' for Lactobacillus delbrueckii subsp. sunkii Kudo et al. 2012. Meanwhile, new combinations Christiangramia oceanisediminis and Christiangramia crocea are also propo...
Source: International Journal of Systematic and Evolutionary Microbiology - April 5, 2024 Category: Microbiology Authors: Ruo-Yun Goo Meng-Syun Li Source Type: research