Identification of the origin of brain metastases based on the relative methylation orderings of CpG sites
. (Source: Epigenetics)
Source: Epigenetics - October 23, 2020 Category: Genetics & Stem Cells Authors: Hui Liu Jianming Chen Haifeng Chen Jie Xia Ouxi Wang Jiajing Xie Meifeng Li Zheng Guo Guoping Chen Haidan Yan Source Type: research

DNA methylation biomarker selected by an ensemble machine learning approach predicts mortality risk in an HIV-positive veteran population
. (Source: Epigenetics)
Source: Epigenetics - October 23, 2020 Category: Genetics & Stem Cells Authors: Chang Shu Amy C. Justice Xinyu Zhang Vincent C. Marconi Dana B. Hancock Eric O. Johnson Ke Xu Source Type: research

Network modules linking expression and methylation in prefrontal cortex of schizophrenia
. (Source: Epigenetics)
Source: Epigenetics - October 20, 2020 Category: Genetics & Stem Cells Authors: Dongdong Lin Jiayu Chen Kuaikuai Duan Nora Perrone-Bizzozero Jing Sui Vince Calhoun Jingyu Liu Source Type: research

Birth weight associations with DNA methylation differences in an adult population
. (Source: Epigenetics)
Source: Epigenetics - October 20, 2020 Category: Genetics & Stem Cells Authors: Rebecca A. Madden Daniel L. McCartney Rosie M. Walker Robert F. Hillary Mairead L. Bermingham Konrad Rawlik Stewart W. Morris Archie Campbell David J. Porteous Ian J. Deary Kathryn L. Evans Jonathan Hafferty Andrew M. McIntosh Riccardo E. Marioni Source Type: research

Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome
. (Source: Epigenetics)
Source: Epigenetics - October 19, 2020 Category: Genetics & Stem Cells Authors: Ruben Van Paemel Andries De Koker Christa Caggiano Annelien Morlion Pieter Mestdagh Bram De Wilde Jo Vandesompele Katleen De Preter Source Type: research

The m6A epitranscriptome opens a new charter in immune system logic
. (Source: Epigenetics)
Source: Epigenetics - October 19, 2020 Category: Genetics & Stem Cells Authors: Zhonghua Ma Xiangyu Gao You Shuai Xiaofang Xing Jiafu Ji Source Type: research

Genome-wide DNA methylation profiling in human breast tissue by illumina TruSeq methyl capture EPIC sequencing and infinium methylationEPIC beadchip microarray
. (Source: Epigenetics)
Source: Epigenetics - October 13, 2020 Category: Genetics & Stem Cells Authors: Nan Lin Jinpeng Liu James Castle Jun Wan Aditi Shendre Yunlong Liu Chi Wang Chunyan He Source Type: research

Cell-free DNA Methylation and Transcriptomic Signature Prediction of Pregnancies with Adverse Outcomes
. (Source: Epigenetics)
Source: Epigenetics - October 13, 2020 Category: Genetics & Stem Cells Authors: Giorgia Del Vecchio Qingjiao Li Wenyuan Li Shanthie Thamotharan Anela Tosevska Marco Morselli Kyunghyun Sung Carla Janzen Xianghong Zhou Matteo Pellegrini Sherin U. Devaskar Source Type: research

Recent insights into Histone Acetyltransferase-1: biological function and involvement in pathogenesis
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: Angelita Poziello Angela Nebbioso Hendrik G. Stunnenberg Joost H.A. Martens Vincenzo Carafa Lucia Altucci Source Type: research

Integrated analysis of mRNA and microRNA expression profiles reveals differential transcriptome signature in ischaemic and dilated cardiomyopathy induced heart failure
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: Xiuli Shao Xiaolin Zhang Lei Yang Ruijia Zhang Rongli Zhu Rui Feng Source Type: research

Adolescent sleep timing and dietary patterns in relation to DNA methylation of core circadian genes: a pilot study of Mexican youth
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: Erica C. Jansen Dana Dolinoy Karen E. Peterson Louise M. O ’Brien Ronald D. Chervin Alejandra Cantoral Martha Mar ía Tellez-Rojo Maritsa Solano-Gonzalez Jaclyn Goodrich Source Type: research

CUE: CpG impUtation ensemble for DNA methylation levels across the human methylation450 (HM450) and EPIC (HM850) BeadChip platforms
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: Gang Li Laura Raffield Mark Logue Mark W. Miller Hudson P. Santos T. Michael O ’Shea Rebecca C. Fry Yun Li Source Type: research

microRNA27a-3p mediates reduction of the Wnt antagonist sFRP-1 in systemic sclerosis
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: John Henderson Sarah Wilkinson Stefan Przyborski Richard Stratton Steven O ’Reilly Source Type: research

Placental microRNA expression associates with birthweight through control of adipokines: results from two independent cohorts
. (Source: Epigenetics)
Source: Epigenetics - October 4, 2020 Category: Genetics & Stem Cells Authors: Elizabeth M. Kennedy Karen Hermetz Amber Burt Todd M. Everson Maya Deyssenroth Ke Hao Jia Chen Margaret R Karagas Dong Pei Devin C Koestler Carmen J Marsit Source Type: research

Longitudinal data reveal strong genetic and weak non-genetic components of ethnicity-dependent blood DNA methylation levels
. (Source: Epigenetics)
Source: Epigenetics - September 29, 2020 Category: Genetics & Stem Cells Authors: Chris McKennan Katherine Naughton Catherine Stanhope Meyer Kattan George T. O ’Connor Megan T. Sandel Cynthia M. Visness Robert A. Wood Leonard B. Bacharier Avraham Beigelman Stephanie Lovinsky-Desir Alkis Togias James E. Gern Dan Nicolae Carole Ober Source Type: research

Imprinting analysis by droplet digital PCR coupled with locked nucleic acid TaqMan probes
. (Source: Epigenetics)
Source: Epigenetics - September 23, 2020 Category: Genetics & Stem Cells Authors: Maiko Mitake Shiori Hirano Tatsuya Kishino Source Type: research

Age-related DNA methylation in paired normal and tumour breast tissue in Chinese breast cancer patients
. (Source: Epigenetics)
Source: Epigenetics - September 23, 2020 Category: Genetics & Stem Cells Authors: Maeve Kiely Lap Ah Tse Hela Koka Difei Wang Priscilla Lee Feng Wang Cherry Wu Koon Ho Tsang Wing-Cheong Chan Sze Hong Law Han Zhang Eric Karlins Bin Zhu Amy Hutchinson Belynda Hicks Bin Zhu Xiaohong R. Yang Source Type: research

Sex-specific associations with DNA methylation in lung tissue demonstrate smoking interactions
. (Source: Epigenetics)
Source: Epigenetics - September 22, 2020 Category: Genetics & Stem Cells Authors: Hyeon-Kyoung Koo Jarrett Morrow Priyadarshini Kachroo Kelan Tantisira Scott T Weiss Craig P Hersh Edwin K Silverman Dawn L DeMeo Source Type: research

A mathematical model exhibiting the effect of DNA methylation on the stability boundary in cell-fate networks
. (Source: Epigenetics)
Source: Epigenetics - September 21, 2020 Category: Genetics & Stem Cells Authors: Tianchi Chen M. Ali Al-Radhawi Eduardo D. Sontag Source Type: research

Global epigenetic alterations of mesenchymal stem cells in obesity: the role of vitamin C reprogramming
. (Source: Epigenetics)
Source: Epigenetics - September 20, 2020 Category: Genetics & Stem Cells Authors: Mohsen Afarideh Roman Thaler Farzaneh Khani Hui Tang Kyra L. Jordan Sabena M. Conley Ishran M. Saadiq Yasin Obeidat Aditya S. Pawar Alfonso Eirin Xiang-Yang Zhu Amir Lerman Andre J. van Wijnen Lilach O. Lerman Source Type: research

“Epigenome-wide methylation profile of chronic kidney disease-derived arterial DNA uncovers novel pathways in disease-associated cardiovascular pathology.”
. (Source: Epigenetics)
Source: Epigenetics - September 14, 2020 Category: Genetics & Stem Cells Authors: Athina Dritsoula Maria Kislikova Amin Oomatia Amy P. Webster Stephan Beck Markella Ponticos Ben Lindsey Jill Norman David C. Wheeler Thomas Oates Ben Caplin Source Type: research

CYP2S1 might regulate proliferation and immune response of keratinocyte in psoriasis
. (Source: Epigenetics)
Source: Epigenetics - September 12, 2020 Category: Genetics & Stem Cells Authors: Yujun Sheng Leilei Wen Xiaodong Zheng Mengqing Li Dan Wang Sixian Chen Ran Li Lili Tang Fusheng Zhou Source Type: research

Maternal atopy and offspring epigenome-wide methylation signature
. (Source: Epigenetics)
Source: Epigenetics - September 8, 2020 Category: Genetics & Stem Cells Authors: Danielewicz Hanna Gurgul Artur D ębińska Anna Myszczyszyn Grzegorz Szmato ła Tomasz Myszkal Anna Jasielczuk Igor Drabik-Chamerska Anna Hirnle Lidia Boznanski Andrzej Source Type: research

Music-listening regulates human microRNA expression
. (Source: Epigenetics)
Source: Epigenetics - September 5, 2020 Category: Genetics & Stem Cells Authors: Preethy Sasidharan Nair Pirre Raijas Minna Ahvenainen Anju K. Philips Liisa Ukkola-Vuoti Irma J ärvelä Source Type: research

DNA methylation profiles unique to Kalahari KhoeSan individuals
. (Source: Epigenetics)
Source: Epigenetics - September 5, 2020 Category: Genetics & Stem Cells Authors: Alexander Goncearenco Brenna A. LaBarre Hanna M. Petrykowska Weerachai Jaratlerdsiri M. S. Riana Bornman Stephen D. Turner Vanessa M. Hayes Laura Elnitski Source Type: research

Genome-wide microRNA expression analysis in human placenta reveals sex-specific patterns: an ENVIRONAGE birth cohort study
. (Source: Epigenetics)
Source: Epigenetics - September 5, 2020 Category: Genetics & Stem Cells Authors: Maria Tsamou Karen Vrijens Congrong Wang Ellen Winckelmans Kristof Y. Neven Narjes Madhloum Theo M. de Kok Tim S. Nawrot Source Type: research

In silico structural analysis of sequences containing 5-hydroxymethylcytosine reveals its potential as binding regulator for development, ageing and cancer-related transcription factors
. (Source: Epigenetics)
Source: Epigenetics - September 1, 2020 Category: Genetics & Stem Cells Authors: Andigoni Malousi Alexandra-Zoi Andreou Sofia Kouidou Source Type: research

SET1/MLL family of proteins: functions beyond histone methylation
. (Source: Epigenetics)
Source: Epigenetics - August 31, 2020 Category: Genetics & Stem Cells Authors: Jeyapal Sugeedha Jyoti Gautam Shweta Tyagi Source Type: research

A genome-wide study of DNA methylation in white blood cells and asthma in Latino children and youth
. (Source: Epigenetics)
Source: Epigenetics - August 31, 2020 Category: Genetics & Stem Cells Authors: Yale Jiang Erick Forno Yueh-Ying Han Zhongli Xu Donglei Hu Nadia Boutaoui Celeste Eng Edna Acosta-P érez Scott Huntsman Angel Col ón-Semidey Kevin L. Keys Jos é R. Rodríguez-Santana Mar ía Alvarez Maria Pino-Yanes Glorisa Canino Wei Chen Esteban G. B Source Type: research

Comparing a new method for mapping nucleosomes in simian virus 40 chromatin to standard procedures
. (Source: Epigenetics)
Source: Epigenetics - August 29, 2020 Category: Genetics & Stem Cells Authors: Barry Milavetz Jacob Haugen Kincaid Rowbotham Source Type: research

Germline DNMT3A mutation in familial acute myeloid leukaemia
. (Source: Epigenetics)
Source: Epigenetics - August 27, 2020 Category: Genetics & Stem Cells Authors: Courtney D. DiNardo Hannah C. Beird Marcos Estecio Swanand Hardikar Koichi Takahashi Sarah A. Bannon Gautam Borthakur Elias Jabbour Curtis Gumbs Joseph D. Khoury Mark Routbort Ting Gong Kimie Kondo Hagop Kantarjian Guillermo Garcia-Manero Taiping Chen P. Source Type: research

Chromatin profiling reveals relocalization of lysine-specific demethylase 1 by an oncogenic fusion protein
. (Source: Epigenetics)
Source: Epigenetics - August 25, 2020 Category: Genetics & Stem Cells Authors: Emily R. Theisen Julia Selich-Anderson Kyle R. Miller Jason M. Tanner Cenny Taslim Kathleen I. Pishas Sunil Sharma Stephen L. Lessnick Source Type: research

Associations between maternal lifetime stressors and negative events in pregnancy and breast milk-derived extracellular vesicle microRNAs in the programming of intergenerational stress mechanisms (PRISM) pregnancy cohort
. (Source: Epigenetics)
Source: Epigenetics - August 25, 2020 Category: Genetics & Stem Cells Authors: Anne K. Bozack Elena Colicino Rodosthenis Rodosthenous Tessa R. Bloomquist Andrea A. Baccarelli Robert O. Wright Rosalind J. Wright Alison G. Lee Source Type: research

Deacetylation of H4 lysine16 affects acetylation of lysine residues in histone H3 and H4 and promotes transcription of constitutive genes
. (Source: Epigenetics)
Source: Epigenetics - August 23, 2020 Category: Genetics & Stem Cells Authors: Anagh Ray Preeti Khan Ronita Nag Chaudhuri Source Type: research

Genome-wide DNA methylation alteration in prenatally stressed Brahman heifer calves with the advancement of age
. (Source: Epigenetics)
Source: Epigenetics - August 19, 2020 Category: Genetics & Stem Cells Authors: Kubra Z. Cilkiz Emilie C. Baker Penny K. Riggs Brittni P. Littlejohn Charles R. Long Thomas H. Welsh Ronald D. Randel David Greg Riley Source Type: research

Reliability of DNA methylation measures using Illumina methylation BeadChip
. (Source: Epigenetics)
Source: Epigenetics - August 14, 2020 Category: Genetics & Stem Cells Authors: Zongli Xu Jack A. Taylor Source Type: research

Altered SOCS3 DNA methylation within exon 2 is associated with increased mRNA expression in visceral adipose tissue in gestational diabetes
. (Source: Epigenetics)
Source: Epigenetics - August 12, 2020 Category: Genetics & Stem Cells Authors: Rebecca C. Rancourt Raffael Ott Karen Schellong Thomas Ziska Kerstin Melchior Wolfgang Henrich Andreas Plagemann Source Type: research

The influence of obesity on folate status, DNA methylation and cancer-related gene expression in normal breast tissues from premenopausal women
. (Source: Epigenetics)
Source: Epigenetics - August 12, 2020 Category: Genetics & Stem Cells Authors: Armina-Lyn M. Frederick Chi Guo Ann Meyer Liying Yan Sallie S. Schneider Zhenhua Liu Source Type: research

Comprehensive analysis of the transcriptome-wide m6A methylome in colorectal cancer by MeRIP sequencing
. (Source: Epigenetics)
Source: Epigenetics - August 12, 2020 Category: Genetics & Stem Cells Authors: Zhen Zhang Quan Wang Mengmeng Zhang Wei Zhang Long Zhao Changjiang Yang Bo Wang Kewei Jiang Yingjiang Ye Zhanlong Shen Shan Wang Source Type: research

Epigenetic alterations as therapeutic targets in Testicular Germ Cell Tumours : current and future application of ‘epidrugs’
. (Source: Epigenetics)
Source: Epigenetics - August 12, 2020 Category: Genetics & Stem Cells Authors: Ana Rita Cardoso Jo ão Lobo Vera Miranda-Gon çalves Rui Henrique Carmen Jer ónimo Source Type: research

DNA methylation patterns respond to thermal stress in the viviparous cockroach Diploptera punctata
. (Source: Epigenetics)
Source: Epigenetics - August 9, 2020 Category: Genetics & Stem Cells Authors: Mariana Villalba de la Pe ña Veysi Piskobulu Christopher Murgatroyd Reinmar Hager Source Type: research

Histone variants in skeletal myogenesis
. (Source: Epigenetics)
Source: Epigenetics - August 2, 2020 Category: Genetics & Stem Cells Authors: Nandini Karthik Reshma Taneja Source Type: research

Dynamic chromatin accessibility landscape changes following interleukin-1 stimulation
. (Source: Epigenetics)
Source: Epigenetics - August 2, 2020 Category: Genetics & Stem Cells Authors: Matt J Barter Kathleen Cheung Julia Falk Andreas C Panagiotopoulos Caitlin Cosimini Siobhan O ’Brien Karina Teja-Putri Graham Neill David J Deehan David A. Young Source Type: research

Epigenetic mechanisms regulating COVID-19 infection
. (Source: Epigenetics)
Source: Epigenetics - July 29, 2020 Category: Genetics & Stem Cells Authors: Sarantis Chlamydas Athanasios G. Papavassiliou Christina Piperi Source Type: research

Cytosine methylation patterns suggest a role of methylation in plastic and adaptive responses to temperature in European grayling (Thymallus thymallus) populations
. (Source: Epigenetics)
Source: Epigenetics - July 29, 2020 Category: Genetics & Stem Cells Authors: Tiina S ävilammi Spiros Papakostas Erica H. Leder L. Asbj ørn Vøllestad Paul V. Debes Craig R. Primmer Source Type: research

Expression of UDP Glucuronosyltransferases 2B15 and 2B17 is associated with methylation status in prostate cancer cells
. (Source: Epigenetics)
Source: Epigenetics - July 26, 2020 Category: Genetics & Stem Cells Authors: Farideh Shafiee-Kermani Skyla T. Carney Dereje Jima Utibe C. Utin LaNeisha B. Farrar Melvin O. Oputa Marcono R. Hines H. Karimi Kinyamu Kevin W. Trotter Trevor K. Archer Cathrine Hoyo Beverly H. Koller Stephen J. Freedland Delores J. Grant Source Type: research

Maternal prenatal depression and epigenetic age deceleration: testing potentially confounding effects of prenatal stress and SSRI use
. (Source: Epigenetics)
Source: Epigenetics - July 23, 2020 Category: Genetics & Stem Cells Authors: Brooke G. McKenna Cassandra L. Hendrix Patricia A. Brennan Alicia K. Smith Zachary N. Stowe D. Jeffrey Newport Anna K. Knight Source Type: research

Cross-tolerance: embryonic heat conditioning induces inflammatory resilience by affecting different layers of epigenetic mechanisms regulating IL6 expression later in life
. (Source: Epigenetics)
Source: Epigenetics - July 23, 2020 Category: Genetics & Stem Cells Authors: Tali Rosenberg Tatiana Kisliouk Osher Ben-Nun Tomer Cramer Noam Meiri Source Type: research

Genome-wide DNA methylation differences and polychlorinated biphenyl (PCB) exposure in a US population
. (Source: Epigenetics)
Source: Epigenetics - July 22, 2020 Category: Genetics & Stem Cells Authors: Sarah W. Curtis Dawayland O. Cobb Varun Kilaru Metrecia L. Terrell M. Elizabeth Marder Dana Boyd Barr Carmen J. Marsit Michele Marcus Karen N. Conneely Alicia K. Smith Source Type: research

Epigenome-wide cross-tissue correlation of human bone and blood DNA methylation – can blood be used as a surrogate for bone?
. (Source: Epigenetics)
Source: Epigenetics - July 20, 2020 Category: Genetics & Stem Cells Authors: Parvaneh Ebrahimi Holger Luthman Fiona E McGuigan Kristina E Akesson Source Type: research