Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Exploring microbial worlds: a review of whole genome sequencing and its application in characterizing the microbial communities
Crit Rev Microbiol. 2023 Nov 25:1-25. doi: 10.1080/1040841X.2023.2282447. Online ahead of print.ABSTRACTThe classical microbiology techniques have inherent limitations in unraveling the complexity of microbial communities, necessitating the pivotal role of sequencing in studying the diversity of microbial communities. Whole genome sequencing (WGS) enables researchers to uncover the metabolic capabilities of the microbial community, providing valuable insights into the microbiome. Herein, we present an overview of the rapid advancements achieved thus far in the use of WGS in microbiome research. There was an upsurge in publ...
Source: Critical Reviews in Microbiology - November 25, 2023 Category: Microbiology Authors: Suleiman Aminu AbdulAziz Ascandari Meriem Laamarti Nour El Houda Safdi Achraf El Allali Rachid Daoud Source Type: research
Emerging strategies to target virulence in < em > Pseudomonas aeruginosa < /em > respiratory infections
Crit Rev Microbiol. 2023 Nov 24:1-16. doi: 10.1080/1040841X.2023.2285995. Online ahead of print.ABSTRACTPseudomonas aeruginosa is an opportunistic pathogen that is responsible for infections in people living with chronic respiratory conditions, such as cystic fibrosis (CF) and non-CF bronchiectasis (NCFB). Traditionally, in people with chronic respiratory disorders, P. aeruginosa infection has been managed with a combination of inhaled and intravenous antibiotic therapies. However, due in part to the prolonged use of antibiotics in these people, the emergence of multi-drug resistant P. aeruginosa strains is a growing conce...
Source: Critical Reviews in Microbiology - November 24, 2023 Category: Microbiology Authors: Tegan M Hibbert Marvin Whiteley Stephen A Renshaw Daniel R Neill Joanne L Fothergill Source Type: research
Emerging strategies to target virulence in < em > Pseudomonas aeruginosa < /em > respiratory infections
Crit Rev Microbiol. 2023 Nov 24:1-16. doi: 10.1080/1040841X.2023.2285995. Online ahead of print.ABSTRACTPseudomonas aeruginosa is an opportunistic pathogen that is responsible for infections in people living with chronic respiratory conditions, such as cystic fibrosis (CF) and non-CF bronchiectasis (NCFB). Traditionally, in people with chronic respiratory disorders, P. aeruginosa infection has been managed with a combination of inhaled and intravenous antibiotic therapies. However, due in part to the prolonged use of antibiotics in these people, the emergence of multi-drug resistant P. aeruginosa strains is a growing conce...
Source: Critical Reviews in Microbiology - November 24, 2023 Category: Microbiology Authors: Tegan M Hibbert Marvin Whiteley Stephen A Renshaw Daniel R Neill Joanne L Fothergill Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
Natural and synthetic molecules with potential to enhance biofilm formation and virulence properties in < em > Pseudomonas aeruginosa < /em >
Crit Rev Microbiol. 2023 Nov 15:1-29. doi: 10.1080/1040841X.2023.2282459. Online ahead of print.ABSTRACTPseudomonas aeruginosa can efficiently adapt to changing environmental conditions due to its ubiquitous nature, intrinsic/acquired/adaptive resistance mechanisms, high metabolic versatility, and the production of numerous virulence factors. As a result, P. aeruginosa becomes an opportunistic pathogen, causing chronic infection in the lungs and several organs of patients suffering from cystic fibrosis. Biofilm established by P. aeruginosa in host tissues and medical device surfaces has been identified as a major obstructi...
Source: Critical Reviews in Microbiology - November 16, 2023 Category: Microbiology Authors: Geum-Jae Jeong Fazlurrahman Khan Nazia Tabassum Young-Mog Kim Source Type: research
