Pairwise alignment of nucleotide sequences using maximal exact matches

Pairwise alignment of short DNA sequences with affine-gap scoring is a common processing step performed in a range of bioinformatics analyses. Dynamic programming (i.e. Smith-Waterman algorithm) is widely used...

Source: BMC Bioinformatics - May 21, 2019 Category: Bioinformatics Authors: Arash Bayat, Bruno Ga ëta, Aleksandar Ignjatovic and Sri Parameswaran Tags: Methodology article Source Type: research