GSE110718 Reduced representation bisulfite sequencing (RRBS) of cultured cells derived from Parkinson's disease patient [RRBS-seq]

Contributors : Markus Schulze ; Markus J Riemenschneider ; Winkler J ürgen ; Winner BeateSeries Type : Methylation profiling by high throughput sequencingOrganism : Homo sapiensHigh throughput sequencing of MSPI digested, size selected and bisulfite converted genomic DNA from control- and sporadic Parkinson ´s disease patient derived fibroblasts (n=15), induced pluripotent stem cells (n=26) and differentiated midbrain neurons (n=10). We were able to sequence more than 400,000 CpGs at ≥5x coverage in all samples. Nonetheless, statistical analysis with RnBeads did not identify major differences on sin gle CpG or promoter methylation level between control- and Parkinson´s disease patient derived cells in any cell type.
Source: GEO: Gene Expression Omnibus - Category: Genetics & Stem Cells Tags: Methylation profiling by high throughput sequencing Homo sapiens Source Type: research