An Effective Pipeline Based on Relative Coverage for the Genome Assembly of Phytoplasmas and Other Fastidious Prokaryotes.

Conclusion: For phytoplasma infected samples containing >2-4% of pathogen DNA and an isogenic reference healthy sample, the resulting assemblies can be next to complete. The Phytoassembly source code is available on GitHub at https://github.com/cpolano/phytoassembly. PMID: 30258279 [PubMed]

https://www.ncbi.nlm.nih.gov/pubmed/30258279?dopt=Abstract

Source: Current Genomics - September 29, 2018 Category: Genetics & Stem Cells Tags: Curr Genomics Source Type: research

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