Complex-Trait Prediction in the Era of Big Data

Publication date: Available online 20 August 2018Source: Trends in GeneticsAuthor(s): Gustavo de los Campos, Ana Ines Vazquez, Stephen Hsu, Louis LelloAccurate prediction of complex traits requires using a large number of DNA variants. Advances in statistical and machine learning methodology enable the identification of complex patterns in high-dimensional settings. However, training these highly parameterized methods requires very large data sets. Until recently, such data sets were not available. But the situation is changing rapidly as very large biomedical data sets comprising individual genotype-phenotype data for hundreds of thousands of individuals become available in public and private domains. We argue that the convergence of advances in methodology and the advent of Big Genomic Data will enable unprecedented improvements in complex-trait prediction; we review theory and evidence supporting our claim and discuss challenges and opportunities that Big Data will bring to complex-trait prediction.
Source: Trends in Genetics - Category: Genetics & Stem Cells Source Type: research