GSE86979 Biogeographic conservation and CO2-dynamics of the cytosine methylome in the globally important cyanobacterium Trichodesmium [WGBS]

Contributor : Nathan G WalworthSeries Type : Methylation profiling by high throughput sequencingOrganism : Trichodesmium ; Trichodesmium erythraeum 21-75 ; Trichodesmium erythraeum IMS101 ; Trichodesmium thiebautii VI-1Our paper presents the results of a study in which we used whole genome bisulfite sequencing (WGBS), RNA-Seq (i.e. transcriptomics), high-CO2 physiology experiments, and spatiotemporally separated samples isolated in situ (i.e. directly from the ocean) to examine the metabolic potential of genome-wide cytosine (5mC) methylation (i.e. epigenomics), its potential impacts to transcriptional dynamics under both present-day and future ocean acidification conditions, and its biogeographic conservation in the globally-significant, biogeochemically-critical marine cyanobacterium Trichodesmium.

Source: GEO: Gene Expression Omnibus - March 1, 2018 Category: Genetics & Stem Cells Tags: Methylation profiling by high throughput sequencing Trichodesmium Trichodesmium erythraeum 21-75 Trichodesmium erythraeum IMS101 Trichodesmium thiebautii VI-1 Source Type: research